Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12093 ATGGATTGTGGAAAACCAATGAAGGAAGCACTAGCAGACCTGGATGATGTTGTTGGTTGTTTTGAGTATTATGTTGGTCTTGCCGAAGGGTTGGATGCAAAGCAAAAGGCTCCCGTAAATCTTCCTATGGAGACCTTCAAGAGTTATGTTCTTAAGGAGCCCATTGGGAATGTTGCATTAATTACTCCATGGCATCTTCTGTTTCTTCATTTTAACTGCTTATGCATTCTTTTTCTTTGA 240 0.4 MDCGKPMKEALADLDDVVGCFEYYVGLAEGLDAKQKAPVNLPMETFKSYVLKEPIGNVALITPWHLLFLHFNCLCILFL. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12093 79 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 66 IPR016162 GO:0016491
Seca4g12093 79 SUPERFAMILY ALDH-like 2 71 IPR016161 GO:0016491
Seca4g12093 79 PANTHER ALDEHYDE DEHYDROGENASE 2 65 - -
Seca4g12093 79 Pfam Aldehyde dehydrogenase family 2 65 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12093 Seca-Chr4 261852506 261852830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12093 1 69 Aldehyde Dehydrogenase Gene Family AT1G74920 71.014 2.24e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12093 K00130 - gmx:100170755 117.472