Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12044 ATGGGTGAGGCTCTGCTGTCGGAGCTTGCGACGGAGATAGTGGTCCTGGTGTGCGCTGTCATCGGGATCGTCTTCTCGTTGGTGCAGTGGTTCCTGGTTTCGCGTGTCAAGCTCACGCCGGAGCGGCACGGAACGTCGTCGTCCCCTCGCAACAACAAGAACGGTTATGGTGACTACCTAATTGAGGAAGAAGAAGGTATCAACGACCACAACGTCGTCGTCAAATGTGCTGATATACAGAGCGCCATCTCCGAAGGGGCAACGTCCTTTCTTTTCACTGAATATCAATATGTGGGGATCTTCATGGTTGCTTTTGCAATCTTGATCTTCCTTTTCCTGGGCTCTGTGGAAAGCTTCAGTACTAAGAGCCAGCCCTGCACATATGATATGAGCAAGCTTTGCAAGCCAGCCCTTGCAACTGCATTGTTTAGCATTGTGTCTTTCTTGCTTGGTGCTATAACCTCAGTCCTGTCTGGTTTCCTTGGGATGAAAATTGCGACCTATGCCAATGCAAGGACAACCTTGGAAGCGAGAAAGGGAGTCGGAAAGGCTTTTATTACTGCATTTAGGTCTGTTGCAGTGATGGGTTTCCTTCTTGCAACAAATGGTCTTTTGGTGCTCTACATTGCCATCAATCTCTTCAAGCTTTATTATGGTGATGATTGGGAGGGTCTTTTTGAGGCTATAACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGAAGAGTTGGTGGTGGTATATATACCAAGGCTGCAGATGTAGGTGCTGATCTAGTTGGGAAAGTTGAAAGAAACATCCCTGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCCGGGATGGGTTCTGATCTTTTTGGTTCATATGCTGAATCATCCTATGCTGCCCTAGTTGTTGCTTCAATTTCCTCATTTGGAATCAACCATGAGTTCGCTGCTATGTTATATCCCCTACTCATCAGTTCCATGGGCATTCTTGTCTGTTTGATTACTACTCTCTTTGCAACTGATTTCTTTGAAATCAAGGTTGTCAAGGAAATTGAAGCCGCATTGAAAAAGCAGCTTATCATCTCCAAAGTACTCATGACTGTTGGAATTGCAATTATTACTTGGCTTGCTTTGCCATCATCATTCACAATTTTCAACTTTGGGGTTCAAAAGGAAGTAAAGAGTTGGCAGCTGTTCCTCTGTGTGGGTGTTGGTCTTTGGGCTGGACTTATTATTGGGTTTGTTACTGAATATTATACAAGCAATGCTTATAGGTAG 1302 0.4493 MGEALLSELATEIVVLVCAVIGIVFSLVQWFLVSRVKLTPERHGTSSSPRNNKNGYGDYLIEEEEGINDHNVVVKCADIQSAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVESFSTKSQPCTYDMSKLCKPALATALFSIVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSVAVMGFLLATNGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSYAALVVASISSFGINHEFAAMLYPLLISSMGILVCLITTLFATDFFEIKVVKEIEAALKKQLIISKVLMTVGIAIITWLALPSSFTIFNFGVQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYR. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12044 433 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 433 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca4g12044 433 Pfam Inorganic H+ pyrophosphatase 45 433 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12044 Seca-Chr4 261256620 261262265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12044 4 432 Primary Pumps ATPases AT1G15690 83.023 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12044 K23025 - gmx:100794166 797.734