Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11992 ATGATTAAATTGCAGACTTGTGTGGAAAAAGAACTAGAGAGCCTGAAAGAGATTATCCTAAAAGGTGAAGATAAAGGAGACAAGAAAAAGGATACCTTTGACCCTGAGAAGATAGATGCATACTTGCCTGTTAGAGTAAATGAGCAGAGAGTGAGCAATCTTTTACAAGCACTCTTTGTTGGAGCATCAGTTTTTGCTATGCCTATCATAAAAAAGATTCCAACTTCTGTTCTGTGGGGATACTTTGCATACATGGCAATTGATAGTCTTCCTGGAAACCAATTCTGGGAAAGGATACTGCTTCTCTTTGTTACACCTAGACGGTGGTACAAGTTGTTAGAGGGGGACCATGCTTCCTTTGTGGAATCAGTACCAATCAGATACATAATCTTGTTCACAATCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAATGACATGGATTCCAACTGCTGGAATCCTGTTCCCCTTGCCTTTCTTTGTGTTGATCTTGGTGAGGAAGTATGTTCTTCCCAAGCTGTTCAATCCTCACCATCTAAGTGAACTAGATAGAGCTGAATATGAGGAAATTGCTGGTGCTCCAAGACTTTCTTTTAGTATGGAATCACCTAGTTTTGGATCAAGGGAAGTATCTGATAGTGAAATATTAGATGAATTAACTACTAGCAGAGGAGAGCTGAAGGTCAGAACTGTTAGCTTTAGAGAGGAAAGGCATGGTCAGGGCTTGCAGATCTATCCTGATGAAATAGTTTGTGAAAATGAATTATCAGACAGTTAG 780 0.3949 MIKLQTCVEKELESLKEIILKGEDKGDKKKDTFDPEKIDAYLPVRVNEQRVSNLLQALFVGASVFAMPIIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPRRWYKLLEGDHASFVESVPIRYIILFTIFQCVYFLVCFGMTWIPTAGILFPLPFFVLILVRKYVLPKLFNPHHLSELDRAEYEEIAGAPRLSFSMESPSFGSREVSDSEILDELTTSRGELKVRTVSFREERHGQGLQIYPDEIVCENELSDS. 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11992 259 Coils Coil 256 259 - -
Seca4g11992 259 PANTHER ANION EXCHANGE PROTEIN 17 192 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca4g11992 259 Pfam HCO3- transporter family 44 134 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11992 Seca-Chr4 260515900 260516967 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11992 11 251 Antiporters AT1G15460 62.651 1.72e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11992 K24194 - gmx:100811184 361.303