Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11937 ATGATTCAAAATGGTTGCATTTTATACCAAGGGTGCACTCCTGTGAATTCTAGGCCTTGCAAGCCTGTTATACCATGTGCCTCTGTATTGAGTTGCGCTTCTCAAATGCCTGCTAAGTTTGCTGTCTCAAGCATCAGGAGTTCTTGGGGACATAATTTAGAAAATAAATCCTTGTTGCCAACAGGAATGACATTTTCAAACATGTCCTCTGCATCAAGCCTGCTTTTAAGTGGGGGTCAAAATCTTCTGTTCCGCACTATCCCCTTGTTACCCAGGGTGCGCAAGCCTTGTATGGCCCCTCGAGCATCAAAGGATGTCCCAACTAGCTTCCGTTATCCACCAATGACCACAAAACCCAAGTGGTGGTGGAGAACATTAGCATGCCTCCCTTACCTCATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATAATCTTCACCCGTTTTTGGAAATGTTTGAATTCTACACATACCCTTTTCTCATGGCAATTGGGAGCCTACCTAGCTGGTTTCTAATGGCATACTTCTTTGTTGCATATCTTGGCATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCATGTTGTGATGGGAATGTTATTGGAGATAGCCTTGCAGGTTATAGGGACTGTGAGTCGTTGGATGCCACTATCACTCTATTGGGGTAAACTGGGAATGCATTTCTGGACTGCTGTTTCATTTGGTTACCTCTTTACCGTCTTGGAGTGCATAAGGTGTGCTATTGTGGGTATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCATATATCCAAATACCATATGATTAA 822 0.4367 MIQNGCILYQGCTPVNSRPCKPVIPCASVLSCASQMPAKFAVSSIRSSWGHNLENKSLLPTGMTFSNMSSASSLLLSGGQNLLFRTIPLLPRVRKPCMAPRASKDVPTSFRYPPMTTKPKWWWRTLACLPYLMPLHETWMYAETAYNLHPFLEMFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAVSFGYLFTVLECIRCAIVGMYADIPFVCDAAYIQIPYD. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11937 273 NCBIfam Tic20 family chloroplast protein importer 1 273 IPR005691 -
Seca4g11937 273 Pfam Chloroplast import apparatus Tic20-like 93 266 IPR005691 -
Seca4g11937 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 31 273 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11937 Seca-Chr4 259951106 259953177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11937 61 273 Chloroplast and Mitochondria Gene Families AT4G03320 39.815 1.02e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11937 - - gmx:100818669 483.026