Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11918 ATGGCAACTTTGATATTGCCCAAGATAAGCTTGCTGATGCTTGTGCTGTGCCTTTTCCTCTCTTTCGATGACCACAAGTACACCCAAATCCCCAACAACACATTGAACACCATTCCCATACATTCCTTTTCCAAAGGCCCTGTCTCTTTATCTGTCAAGAACTCTGATTCTTCTTCTCACTCCTTCCTTGAATATGATTTCTACCGCAATTCCTGCCCCCAAGCAGAGCGTATTATTCGTGCTACAATTCACCATATTCACCGCGCTACACCCAATTTGGTTCCTGCTCTCATTCGTCTTGCTTTCCATGATTGCTTCATTCAGGGATGTGATGCTTCTGTTTTGTTAGATGGTGATGATTACATTGATTCAGAGAAAGAGTCGCCACCCAATGGAAGTCTTAAAGGCTTTGAAGTCATCGAGACCATCAAATCCAAGCTTGAAGAAGCATGCCCTGGGGTTGTTTCTTGTGCTGATATTGTTGTATTGGCAGCAAGAGACTGTGTGGTTCTGGCTGGTGGTCCATTCTATCCGTTATATACAGGCAGAAGAGATGGTTCTAACTCTTTCGCTGACATAGCAACATACGAGCTTCCTTCACCCTACGGTGATTTATCCCAAACCCTTGCATCCTTCAAATCAAGGGGATTTGATGAAAAAGAGATGGTCACTCTCTTAGGTTCCCACAGCATTGGGGTAATACACTGCCAATTCTTCCAAAACCGTCTCTATAACTTTAGTGGAACTAATGAACCTGACCCTTCTCTAGATATTGAATTTCTAAATCTACTAAGATCAAGGTGCAATCACACTGATGCATCATCCTCTCCAGCATCAGGATATACTTCCCATGGCTCAAATTCATCTGTAGCATTTAAGCCAACTCCATTCAAAGGCTCATCTTCTTCCTCAGTTGAAGATCCAGGAATGATTATGGACTCGGAGCAACCTCAATCAGATTTTGGGATGTTATACTACCGCAGCCTATTGGAAGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGGAAGGAGAAAAAACCAAGCATTTGGTTAAAGAATATGCATTTAAGCCTACTTTGTTCCAACAAGATTTTGCCCTGGCAATGATGAAACTCTCAGATCTCCGGGTCTTGACACTGCCTATGGGACAGATTAGGCTCAATTGTTCAAAGGTTGCATGA 1185 0.4287 MATLILPKISLLMLVLCLFLSFDDHKYTQIPNNTLNTIPIHSFSKGPVSLSVKNSDSSSHSFLEYDFYRNSCPQAERIIRATIHHIHRATPNLVPALIRLAFHDCFIQGCDASVLLDGDDYIDSEKESPPNGSLKGFEVIETIKSKLEEACPGVVSCADIVVLAARDCVVLAGGPFYPLYTGRRDGSNSFADIATYELPSPYGDLSQTLASFKSRGFDEKEMVTLLGSHSIGVIHCQFFQNRLYNFSGTNEPDPSLDIEFLNLLRSRCNHTDASSSPASGYTSHGSNSSVAFKPTPFKGSSSSSVEDPGMIMDSEQPQSDFGMLYYRSLLEGKGILYADQQLMEGEKTKHLVKEYAFKPTLFQQDFALAMMKLSDLRVLTLPMGQIRLNCSKVA. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11918 394 ProSitePatterns Peroxidases proximal heme-ligand signature. 221 231 IPR019793 -
Seca4g11918 394 PRINTS Haem peroxidase superfamily signature 173 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Haem peroxidase superfamily signature 155 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Haem peroxidase superfamily signature 94 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 Gene3D Peroxidase, domain 2 204 373 - -
Seca4g11918 394 ProSiteProfiles Plant heme peroxidase family profile. 62 394 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 220 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 72 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 154 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 96 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 135 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 PRINTS Plant peroxidase signature 368 381 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 Pfam Peroxidase 80 356 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 SUPERFAMILY Heme-dependent peroxidases 63 393 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 Gene3D - 63 203 - -
Seca4g11918 394 MobiDBLite consensus disorder prediction 274 309 - -
Seca4g11918 394 FunFam Peroxidase 66 201 - -
Seca4g11918 394 ProSitePatterns Peroxidases active site signature. 94 105 IPR019794 GO:0004601
Seca4g11918 394 PANTHER PEROXIDASE 25-RELATED 19 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g11918 394 CDD secretory_peroxidase 63 393 IPR033905 GO:0004601|GO:0042744
Seca4g11918 394 MobiDBLite consensus disorder prediction 274 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11918 Seca-Chr4 259789240 259791408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11918 60 393 Peroxidase AT4G33870 50.298 3.32e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11918 K00430 - mof:131158483 448.743