Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11896 ATGTCAATCCTTAACATATGTTATATACATGTTCACGGGCTTTTCAATGGTTTACTGGCCCCTCTCTACGCAGGTTCCGCGGTAATTTACTCTCTTCACTTCTGTTTCCTAAGCAAATACAAAATTAGAAAAAAAAAGTTAATTTTTGTTCAAGTGGCTAAGAATATTATTGTCTTGTTGAAGGTTGAGTTTTTGCCAAAATTTAGTGTCAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCAAGTGAAGGATCTAAGGCTGATGATGCTATAACTGTATTCACTGGAGTTCCAACTATGTACACCCGACTAATACAAGGTTATCATGCAATGGATCCTGAGCTACAAACCACTTCAGCATCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCTCTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCAGGCACTGTTGGCAAACCATTGCCTGGTGTACAGGTCAGGATTGTTGAAGATGAGGAGAGTGGGAATGAAAAAACTGGAGCTGGTGAACTTTGCGTTAAAAGCACTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGAAATCATTTACAGATGATGGATACTTTAAGACTGGAGATTCAGTTACTACAGATAAAGATGGATATTACATCATTCTAGGACGTACAAATGCCGATATAATCAAGGCTGGTGGCTATAAGCTGTCTGCATTAGAAATTGAATCTGTTATAGTAGAGCATCCAGCTGTCTCAGAATGTTGTGTTTTGGGCTTACCAGACAAAGACTATGGAGAAATTGTAGTTGCAATTATTGTGCCAGAGGCTGGTGCTAAACAAAAGCGAGATGAAGAGTCAAAGCCTGCTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAACTTGCACCTTACAAGATACCAACTCGACTAATCCTGTGGGACTCACTCCCTCGCAATGCCATGGGAAAGGTAAATAAAAAAGAGCTGAAGAAGGTGCTGGAATCAGAGCAGTAA 1110 0.4108 MSILNICYIHVHGLFNGLLAPLYAGSAVIYSLHFCFLSKYKIRKKKLIFVQVAKNIIVLLKVEFLPKFSVRGIWQRWRESYPSEGSKADDAITVFTGVPTMYTRLIQGYHAMDPELQTTSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVRIVEDEESGNEKTGAGELCVKSTSLFKEYWKLPEVTKKSFTDDGYFKTGDSVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVIVEHPAVSECCVLGLPDKDYGEIVVAIIVPEAGAKQKRDEESKPALSLEELSTWAKDKLAPYKIPTRLILWDSLPRNAMGKVNKKELKKVLESEQ. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11896 369 PANTHER ACYL-COA SYNTHETASE 9 365 - -
Seca4g11896 369 Pfam AMP-binding enzyme C-terminal domain 270 355 IPR025110 -
Seca4g11896 369 Gene3D - 257 369 IPR045851 -
Seca4g11896 369 CDD MCS 10 363 - -
Seca4g11896 369 Gene3D - 48 253 IPR042099 -
Seca4g11896 369 Pfam AMP-binding enzyme 91 259 IPR000873 -
Seca4g11896 369 SUPERFAMILY Acetyl-CoA synthetase-like 91 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11896 Seca-Chr4 259635188 259639162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11896 92 365 Monolignol Biosynthesis Gene Families AT4G19010 27.957 8.26e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11896 K18660 - gmx:100813324 545.043