Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11890 ATGGGTCATCAGGAACCGGCGAAGCTGCGGTGGGGTGAATTGGAAGAGGACGACGGCGAGGATCTTGACTTCTTGCTGCCGCCTCGCCAAGTGATAGGCCCCGACGAGAATGGAATAAAGAAAGTCATCGAATACAAGTTCGACGACGACGGCAACAAGGTCAAGATAACCACCACCACGCGCACCCGCAAGCTCGCCAACGCCCGCCTCAGCAAACGCGCCGTCGAACGCCGCTCCTGGCCCAAGTTCGGCGACGCCGTCCACGAAGATGTCGGCAGCCGCCTCACCATGGTCTCCACCGAAGAGATTCTCCTCGAACGCCCCAAGCCTCTTGGTGTGCCAAAACAGAGGAGCCAAAGGCTTCTGACCCGTTGGCTCAATTCCAAAAAGGTGCTGTTCTTATGGTCTGCAGGACTTGTGGGAAGAAGGGTGACCATTGGACTTCGAGGTGTCCGTACAAGGATCTTGCCCAGCCATCTGAGGGATTTGTGGATAAGCCTGCTGCAGCGGATGTTGGGGCTGCTGCAACTGGTTCGACCAAGGGAGCATATGTACCTCCTGGCATGA 567 0.5732 MGHQEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDDDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGVPKQRSQRLLTRWLNSKKVLFLWSAGLVGRRVTIGLRGVRTRILPSHLRDLWISLLQRMLGLLQLVRPREHMYLLA. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11890 188 Pfam Eukaryotic translation initiation factor 3 subunit G 30 113 IPR024675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11890 Seca-Chr4 259602633 259603789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11890 3 112 Eukaryotic Initiation Factors Gene Family AT3G11400 72.727 7.05e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11890 K03248 - gmx:100818725 206.838