Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11840 ATGGCTATGCCTAACTTCCATCCTCCTTCTTCAATAGGGGTCATTTTCGATTGCCATATAAGTTGTGATACATTGAAGAAAGCCTCCAAAAGCAGAAAAATGATGAACATCAATAGCAAAGAATCAGCACTTGTTCTTCTACTCTTTGCATTTCTCTTCCTTACTTGTGGCTATGCACAAGACACTGCCCTTGTACCAGCAATCATAACATTTGGTGACTCTGCCGTCGATGTGGGGAATAATGACTATCTTCCCACTCTTTTCAAGGCTGATTACCCTCCTTATGGGAGAGACTTTGTTAACCACCAACCTACTGGGAGGTTTTGTAATGGAAAATTAGCTACTGATATTACCGCTGAAACACTGGGTTTTACGAGTTATGCACCTGCATATCTTAGCCCACAGGCATCAGGGAAGAACCTTCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTATTTTGAATCATGCTATCCCATTGTCCCAACAGCTAAATTATTACAAGGAATACCAAAGCAAGCTTGCTCAGGTAGCTGGCAGTAAAAAAGCAGCCTCAATTGTAAAGGATGCACTGTACTTATTGAGTGCTGGAAGCAGTGATTTTGTACAAAACTATTATGTCAATCCTTGGATCAACAAGGCCTTGACTCCTGATCAGTATTCATCCTACCTAGTGGATGCATTCTCAAGCTTTGTTAAGGTATTCTGTAAAGCCCTATTACATGTAGTTATTAGGTCACTATCAGAATATAACTTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCAATGAGAATGGTTGTGTCTCAAGACTCAACACTGATGCCCAAGGATTTAACAAGAAGGTCAACTCAGCTGCTGCAAATCTTCAAAAGCAACTTCCTGGTCTTAAGATTGTAATTTTTGATATTTACAAGCCTCTCTATGACCTTGTACAATCCCCTTCAAAATTCGGTTTTGTGGAGGCAAGCAGAGGTTGCTGTGGTACAGGGACTGTAGAGACAACATCCTTGTTGTGCAATCCAAAATCACTAGGAACTTGTTCTAATGCAACCCAATATGTGTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCTGATGCATTAATTGTGCAAGGCATAGCTCTTATCACATAA 1224 0.4109 MAMPNFHPPSSIGVIFDCHISCDTLKKASKSRKMMNINSKESALVLLLFAFLFLTCGYAQDTALVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFTSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLNYYKEYQSKLAQVAGSKKAASIVKDALYLLSAGSSDFVQNYYVNPWINKALTPDQYSSYLVDAFSSFVKVFCKALLHVVIRSLSEYNLYGLGARKIGVTSLPPLGCLPAARTLFGFNENGCVSRLNTDAQGFNKKVNSAAANLQKQLPGLKIVIFDIYKPLYDLVQSPSKFGFVEASRGCCGTGTVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQVLADALIVQGIALIT. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11840 407 Gene3D SGNH hydrolase 58 402 IPR036514 -
Seca4g11840 407 FunFam GDSL esterase/lipase APG 58 403 - -
Seca4g11840 407 CDD SGNH_plant_lipase_like 66 399 IPR035669 -
Seca4g11840 407 PANTHER GDSL ESTERASE/LIPASE EXL3 50 398 - -
Seca4g11840 407 Pfam GDSL-like Lipase/Acylhydrolase 68 397 IPR001087 GO:0016788
Seca4g11840 407 SUPERFAMILY SGNH hydrolase 68 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11840 Seca-Chr4 259029290 259031544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11840 44 399 Pollen Coat Proteome AT1G75910 33.426 9.47e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11840 - - gmx:100793645 647.891