Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11817 ATGTCACTTGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTGATAGAGCTCAATTTCAATATGATTGGCTTTATGGGAGCTATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGAAAGGGATGAAGGGGATTTCAGTTAGTGGAATGAACTACTATGTTTGTCTTTCCATATTGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCCGAGGTGGGGGCTGCAGGATGGCAAACAACTGTGTCTCAGATTGGCCCCAATTTTGTATAG 294 0.4184 MSLVPIIGGCALAAVIELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGISVSGMNYYVCLSILSLLILTPFAIAVEGPEVGAAGWQTTVSQIGPNFV. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11817 97 Pfam Triose-phosphate Transporter family 1 87 IPR004853 -
Seca4g11817 97 PANTHER SOLUTE CARRIER FAMILY 35 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11817 Seca-Chr4 258716893 258717743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11817 1 97 Antiporters AT1G61800 81.443 3.02e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11817 K15283 - gmx:100804205 178.718