Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g11751 | ATGCAAATGGTAACGATTAGACCTGTGGACTATGAACCAAAGGAAGGAGAGATCACATTGGGAACAATGAGCTTCAAGAAGGGAAGAAATCTCAATGACTTGTATAAACCTGATGGATTGGATGAAGTTGTTACTGAAGAATCTACATTCTCAAAGAGAAGGAAGATGGGAAATCTGAAGCTGCAAACCACATTCTCATTCAAATATCTACTTTCAGATAATTCTGGCTCAAAGGAGGGTGGTGATGATGACATGTTCAATAAACAAAGCCCCACAATTTTGTTACCAAAACCAGAAATTTGGTTTTCACCAAAGTCAATTGGTGAGCTTGATGTAGCTGCAATAAAGCTGCAGAAAGTTTACAAGAGCTACAGGACTAGGAGAAATTTGGCAGATTGTGCAGTTGTTTGTGAGGAACTATGGTGGAAGGCTTTAGACTTTGCTGCTCTTAGTCGATGCTCTATATCACATTTTGACTCAGTTAAATCAGAAACAGCCGTTTCAAAATGGGCAAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTGTAAAGATGATAAAGCACAGAAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCCCGTCATCGTTATGGGCACAACTTGCACTTATACTATGTTGTATGGTTTAATAGCCAGAGTTCACAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGCAAAGAAGTAAATCTTGAGGTGTGCCCAAGAAGTGAATTACAAAGGCAGTGCATAAAGTACCTTGGACCTAAAGAAAGGGAAGCATATGAAGTGATTGTAGAGGGAGGAAGGCTTGTTTATAGAAAAAGCAAGGACCTTGTACACACTTATGAGGGATCTAAGTGGATTTTTGTTCTTAGCTCATCTAGAGTTTTGTACGTTGGGGAGAAAAAGAAAGGCCAATTTCAACACTCAAGTTTTCTAGCTGGGGGTGCTACTATTGCATCTGGAAGATTGGTTGCCCAAAATGGAGTTCTTCATGCTATATGGCCCTATAGTGGTCATTACTGTCCTACAAAGAAGAATTTTATGGAATTCATTGGCTTCTTGATGGAACATAATGTGGACTTGACAAATGTAAAGAAGTATGCACTTGATGATGATGTGCCACCTTCAAAACCGGTAGATGAGGAGCTGCAGTTTGAGTCCACAGAGGCTAAGTCTTCCAGTGACTCTGCCACTGCCAAAAATTGCAGTCAAGATAATGTGTGTCACATTGAACATAAAGAGAGCAAGCCATTGTCAAGTAAATGGACTACTGGAGCTGGTCCTAGGATTGGTTGTGTGAGAGAGTACCCAGCAAAACTCCAAGTTAAGGCACTTGAACAGCTCAATCTATCACCTAGAGTCAACCATGAAAAATTTGCTGCCAGGGCACCCATTCCCTCCCCAAGGCCTAGTCCAAAAATCCACCTGTCCCCTAGGCTTGTGCACATGGGAATTCCTAGCCCAAGAGAGAAGGGTGGTGACAAGAGCAAGAGAAAGTGGAAGTTATGGAGGAGCTCTTCAGAAGGTTGTGGATTTGGATCCTCCATGAAGAAAGGGAACGGTGGTGCTGCTTCTGACAAGTATTGTCCCTCGTTTGTGGTGGATGAAGAAGCATTTGCTGCTGCAGTGGCCACTGTGGTACGAACTCCGCTCAAAGACTTCATGGTCATCAAGCACGAATGGGCTGCAACCCGCATCCAGGCTGTGTTTCGAGGCTTCTTGGCAAGGCGAGCTTTGAGGGCCCTGAGGGCAGTGGTGAGGCTGCAAGCTATATTTCGTGGTCGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTGAGGAAGTCTCCAGAAGGAAAAGCTGTACAGAAACTATTAAATGAGCATCGCAACCAAGTTGATCCTGTTAAGCAGGCTGAGCAAGGGTGGTGTGACATTCCAGGAACTGTGGAAGAAGTTAAAACAAAACTAAAAATGAGGCAAGAAGGAGCAATTAAGAGGGATAGAACAATGACATACTCTCACTCTACTCAGGAATCAAGAGTGAGTGCCAGTCCAAATTCTAAAGCTGCTAAGCCAGTGACTCCTCTCAAGCACCGCAGCCGAGATAGTAAGAGCTCTGGAGGTAGCTTGTTAGAACGCTGGATAGCATCTAAGCCATGGGAGAGCAGGTTGATGGAAGAGATCTATTTTGACTCACCAGACATGACTCCATTGTCCAGGAAAAATGATGATCCTGTTCTCCCCTTAAATTCATATCAACAAAATGGTTTAGTCAAAGCAAGAAGGAATGGTGTGACAACCAGGATTTCATCTAAATCACTTACAACCAGTCAATCAACTCCATCATCTTCAGCCAAAAGCTCTGACTGCATGTATGATGATAGCCCTGCATCCACTTCATCCACATCTGAACCATCTACCAACAACACTGCTAAGGTGGAAGCAACAGAGGAAACAAATATTTGTAAACCAAGCTACATGAATATGACAGCATCAACTAAAGCTAAACTGAAAGCTTGTAGATTTTCTCAGAATTCAAAGAGACTCTTTATGGATGATTGTCTGTCTCATAGCAATAGAACAGACTTTCTAAGTGGAGATACTAGAAGCTGTTCTGGTTCCTATCCTTCAACTAATATATGGAAGGATCTCTATGCAACACCACTAAGGGCAAGCTATCAAAAATGA | 2739 | 0.4308 | MQMVTIRPVDYEPKEGEITLGTMSFKKGRNLNDLYKPDGLDEVVTEESTFSKRRKMGNLKLQTTFSFKYLLSDNSGSKEGGDDDMFNKQSPTILLPKPEIWFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFAALSRCSISHFDSVKSETAVSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYVVWFNSQSSQPFFYWLDVGDGKEVNLEVCPRSELQRQCIKYLGPKEREAYEVIVEGGRLVYRKSKDLVHTYEGSKWIFVLSSSRVLYVGEKKKGQFQHSSFLAGGATIASGRLVAQNGVLHAIWPYSGHYCPTKKNFMEFIGFLMEHNVDLTNVKKYALDDDVPPSKPVDEELQFESTEAKSSSDSATAKNCSQDNVCHIEHKESKPLSSKWTTGAGPRIGCVREYPAKLQVKALEQLNLSPRVNHEKFAARAPIPSPRPSPKIHLSPRLVHMGIPSPREKGGDKSKRKWKLWRSSSEGCGFGSSMKKGNGGAASDKYCPSFVVDEEAFAAAVATVVRTPLKDFMVIKHEWAATRIQAVFRGFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARNVRKSPEGKAVQKLLNEHRNQVDPVKQAEQGWCDIPGTVEEVKTKLKMRQEGAIKRDRTMTYSHSTQESRVSASPNSKAAKPVTPLKHRSRDSKSSGGSLLERWIASKPWESRLMEEIYFDSPDMTPLSRKNDDPVLPLNSYQQNGLVKARRNGVTTRISSKSLTTSQSTPSSSAKSSDCMYDDSPASTSSTSEPSTNNTAKVEATEETNICKPSYMNMTASTKAKLKACRFSQNSKRLFMDDCLSHSNRTDFLSGDTRSCSGSYPSTNIWKDLYATPLRASYQK. | 913 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g11751 | 912 | MobiDBLite | consensus disorder prediction | 763 | 832 | - | - | |
Seca4g11751 | 912 | Pfam | IQ calmodulin-binding motif | 113 | 129 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | Pfam | IQ calmodulin-binding motif | 589 | 606 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | Pfam | IQ calmodulin-binding motif | 567 | 586 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | MobiDBLite | consensus disorder prediction | 691 | 706 | - | - | |
Seca4g11751 | 912 | PANTHER | IQ DOMAIN-CONTAINING PROTEIN IQM3 | 52 | 480 | IPR044159 | - | |
Seca4g11751 | 912 | MobiDBLite | consensus disorder prediction | 750 | 832 | - | - | |
Seca4g11751 | 912 | MobiDBLite | consensus disorder prediction | 686 | 726 | - | - | |
Seca4g11751 | 912 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 553 | 607 | IPR027417 | - | |
Seca4g11751 | 912 | SMART | iq_5 | 587 | 608 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | SMART | iq_5 | 109 | 131 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | SMART | iq_5 | 564 | 586 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | ProSiteProfiles | IQ motif profile. | 565 | 593 | IPR000048 | GO:0005515 | |
Seca4g11751 | 912 | Gene3D | - | 563 | 616 | - | - | |
Seca4g11751 | 912 | ProSiteProfiles | IQ motif profile. | 589 | 616 | IPR000048 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g11751 | Seca-Chr4 | 257850317 | 257866737 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g11751 | 503 | 902 | IQD Protein Family | AT1G72670 | 44.581 | 1.27e-82 | 270 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g11751 | - | - | gmx:100805874 | 805.438 |