Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11747 ATGGAGGGTTATGAGGGTCTCTCAAAAAGAGCAGTTGCATATGCAGGAGGCATTCCGTTAGCTCTAGACGTTTTAGGTTCACATCTTCTTTCCAGAAATGCTGAATTCTGGGACTCTGAATTGAGTTATTTGGAGAACAATGAGGAATCCTTGGGCGAAATTCAGAAAGTGTTACAAGTGAGCTACAATGGTTTGCTAAAGCGAGAGAAGGAAATATTTCTGGACATTGCATTCTTTTTCAAAGATGAAAATAAAGATTTTGTCATAAGGATACTTGATGCCTGTGGTTTCAGTGCCACTAGTGGAATAGAAATCCTCAAAGATAAAGCTCTTATAACCATTTCAAACAATAGAATACAAATGCATGACTTGTTACAAAAAATGGCTTTGGATATAGGAACTTATGCAATTGAAGGCATAACAATGGATTTGTCTCAAAAAGTAGATTTACACTTGCGAGCTGACACATTCAACATGATGACCAAGTTAAGGTTTCTTAGATTGTATGTCCCCTTGGGTAAGAAGAGATCAGGTGTTGTATACTGTCCTACAACTCCAATGCCACTTCCTGATACATTGAGGTACTTTGAGTGGAATGGATACCCTTTTAAGTCTCTTCCACCATCTTTTTGTGCTAAGCTGCTTGTTGAGATTCGCTTACCACACAGCGATGTTGAATATCTTGGGATGAATGGAAAGGAGAAATACATTTCATTCAAGAATGGAATGATGATGAAATTGGGTGGACCTTCATTGGAACGCATTATGGAAGATGGCATACTACTAACAATGAAGAGTGCTGCATTTCATAACATACTAGTAAGAAAATACAGTTTGCAAACCCATAGCTACAATTATAACAGTGCTGAGGTTTGTTTACCAGGAAGCAGAGTTCCAAGGCAATTCAAATACAGAACAACAGATTCCTCCATAACTATTGGACTTCCTGACCTTTCCTTCTCCCTGGGATTCATTTTCATTTTCAGCATTGATGAACAGAAGGTTTCTTTTGAGTTCTGTGTTACAAATGATAGAGGGGAACGTGATGGCGTGTTTGGTATGAAAGAGTGTGGGGTCTTCCCAATTTATTTCTCAGAATTTAAAAGGTTTGTAAGCGCAATGAATTTGGATGATGGTTTAATATGGAAGTTGACATCTCAGTTTTCAGAGGAGTTAGGACCGTTGTTGTATGAGGCAATGCAATTTCAATCAGAATCAATTGAAAGATCTGATGAGGGGGAAGAAAATGACATTGAGTCAATTTAA 1266 0.3799 MEGYEGLSKRAVAYAGGIPLALDVLGSHLLSRNAEFWDSELSYLENNEESLGEIQKVLQVSYNGLLKREKEIFLDIAFFFKDENKDFVIRILDACGFSATSGIEILKDKALITISNNRIQMHDLLQKMALDIGTYAIEGITMDLSQKVDLHLRADTFNMMTKLRFLRLYVPLGKKRSGVVYCPTTPMPLPDTLRYFEWNGYPFKSLPPSFCAKLLVEIRLPHSDVEYLGMNGKEKYISFKNGMMMKLGGPSLERIMEDGILLTMKSAAFHNILVRKYSLQTHSYNYNSAEVCLPGSRVPRQFKYRTTDSSITIGLPDLSFSLGFIFIFSIDEQKVSFEFCVTNDRGERDGVFGMKECGVFPIYFSEFKRFVSAMNLDDGLIWKLTSQFSEELGPLLYEAMQFQSESIERSDEGEENDIESI. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11747 421 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 249 IPR044974 GO:0006952
Seca4g11747 421 Gene3D - 1 65 IPR042197 -
Seca4g11747 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 76 IPR027417 -
Seca4g11747 421 SUPERFAMILY "Winged helix" DNA-binding domain 53 134 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11747 Seca-Chr4 257813169 257814779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11747 7 228 WRKY Transcription Factor Family AT5G45050 29.434 6.16e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11747 - - cam:101489032 291.197