Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11745 ATGAAAGCCCTGAGAATTCTTAAATTGTATGGTCAAAGTTCTAGCAATACATACCTCGACTTTCCTACAGCTCTTGAGCCAGTTTCTGACAAACTGAGGTATTTTGAATGGAGTGGTTACCCTTTTGCCTCTCTTCCCCAACCTTTTTGTGCTAAGTTGCTTGTTGAGATTCTGATGCCGCATAGCAATGTTAAACGATTTTGGCAGGGGAGGCAGGAACTTGATAAATTAAAGAGAATTGACCTAAGTGAATGCAAACAGATTGAAGAGCTTCCAAATTTGTCTAAGGCGTCAGGACTTAAATGGGTTAATCTCTCCGGTTGTGAGAATTTGCGTGATCTTCATCCATCTGTTTTATCCGCCGATACACTTGTAACTTTGATACTTGATAGGTGTACAAGGCTTAGGCGAGTTAAAGGTGAGAAGGATTTAAATTCTCTGGAGAATATCAGTGTCAATGGCTGCTTTAGTCTCCAGGAATTTGCAGTGTCCTCAGATTTAATTGAAAACTTTGTTTAA 519 0.3969 MKALRILKLYGQSSSNTYLDFPTALEPVSDKLRYFEWSGYPFASLPQPFCAKLLVEILMPHSNVKRFWQGRQELDKLKRIDLSECKQIEELPNLSKASGLKWVNLSGCENLRDLHPSVLSADTLVTLILDRCTRLRRVKGEKDLNSLENISVNGCFSLQEFAVSSDLIENFV. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11745 172 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 161 IPR044974 GO:0006952
Seca4g11745 172 Gene3D Ribonuclease Inhibitor 1 170 IPR032675 -
Seca4g11745 172 SUPERFAMILY L domain-like 19 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11745 Seca-Chr4 257803554 257804166 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11745 1 161 WRKY Transcription Factor Family AT4G12020 36.471 9.44e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11745 - - vun:114165831 244.973