Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11744 ATGTTGGTTTACATGTCACTTGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTGATAGAGCTCAATTTCAATATGATTGGCTTTATGGGAGCTATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGAAAGGGATGAAGAGGATTTTAGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATATTGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCCAAGGTGTGGGCTGCAAGATGGCAAACAATTGTGTCTCAAATTGGCCCCAATTTTGTATGGTGGGTGGCTGCCCAGAGTGTCTTCTTCCACTTGTATGATCAAGTCTCTTACATGTCCCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCTGTAATTGTTTCTTTCATCCTTATCTTTCACACGCCGGTTCAACCCATCAATGCTGGGCATATTAGTAGTATGACATAG 498 0.4036 MLVYMSLVPIIGGCALAAVIELNFNMIGFMGAMISNLAFVFRNIFSKKGMKRILVSGMNYYACLSILSLLILTPFAIAVEGPKVWAARWQTIVSQIGPNFVWWVAAQSVFFHLYDQVSYMSLDQISPLTFSIGNTMKRISVIVSFILIFHTPVQPINAGHISSMT. 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11744 165 PANTHER SOLUTE CARRIER FAMILY 35 3 158 - -
Seca4g11744 165 Pfam Triose-phosphate Transporter family 2 158 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11744 Seca-Chr4 257795436 257798750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11744 3 158 Antiporters AT1G61800 82.692 4.54e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11744 K15283 - gmx:100804205 290.812