Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11730 ATGGAAGATGAATATCAAAAGTCACTTTCAGAGACCACTGGAAGCTCTGGATCTAATGTAAAAAGGCTTGAGGAGGAGACAGAGAGTAAGATTAAGAATTTAAAGAAATCAGCTTCAAAGGTCTCAACAAATGTTGTTGACATGCTTCTACCATTTGGGGATGACAAGTTCAAAATCATACATTTCCAACCGCTTGATTTATATAATAGTTTCTTGGTAACTATATAG 228 0.3509 MEDEYQKSLSETTGSSGSNVKRLEEETESKIKNLKKSASKVSTNVVDMLLPFGDDKFKIIHFQPLDLYNSFLVTI. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11730 75 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g11730 75 Pfam Vacuolar (H+)-ATPase G subunit 2 50 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca4g11730 75 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 50 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca4g11730 75 Gene3D - 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11730 Seca-Chr4 257584175 257584480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11730 2 52 Primary Pumps ATPases(2) AT3G01390 54.902 5.37e-15 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11730 K02152 - gmx:100818549 84.3445