Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11693 ATGGAGTACTATGAACTAGCAAAGAAGATGGTTGATTATGCCAAAGGTGTTCCATTAGTTCTTAAAGTTTTAGGCCACCTTCTTCATGGAAAAGGTAAAGATATATGGAAAAGCCAATCAAGGATTCTTAAAAAAATGCAAATTAAAGAATTTCATAATGTTCTTAGATCTAGTTACAATGATCTTCATCATAATGAGAGGAGGATATTTTTGGATATTGCATGTTTTTTTGATGGACTGAATTTGAAAGTTAATGACATAAAACGGTTACTGAAAGATCGTCAGTATTCAGTGACTATGGGGTTAGAAAGGCTAAAAGATAAAACCCTAATAACCATTTCTCAAGAGAATATTGTATCAATGCATGACCTTATTCAAGAAATGGCTTTGGAGATTGTCCGGGAAGAATCTATTGAAGACCCTGGAAGACGAAGTCGATTATTAGATCCTGAAGACATTTATGAAGTACTGAAATATAACAAGGGGAGTGAAGCCATTAGAAGCATGGTCGTCAACATGACTATAATTAAGCAGCTACAGTTAAGCCCTCAAGTGTTTGATAAAATGAGCAATCTACAATTTTTGGATATTTATGCTAAAGGGTCTCATAGTTTCATCCATGATGATGAAAGGGGTTTGTATCTTCCTCAAGGGCTTGAATCATTGCCTAATGAACTAAGATATCTTCGTTGGGCATATTACCCTTTGGAATCCTTGCCATCCAAGTTTTCTGCTGAAAAACTTGTTGTATTGATATTGCCACATAGCAGAGTGAAAAAACTTTGGCATCAAGTACAGGATCTTGTGAATTTGAATGTCCTTGTACTCTGTTCATCCACACAACTGATGGAGCTGCCAGATTTTTCAAAAGCCACAAGTCTTAAAGTTATTGATCTCCGTCATTGTGTAGGGTTGACAAGTGTGCATCCATCTGTTTTGCCTCTCAACAAGCTTGAAAAATTGGATCTAAGTGGATGCATTTCCCTTACAAGCCTTCAAAGCAATACCCATTTAAGTTCACTTCGTTCTCTCTCCCTCTGTGGCTGCACAGCACTAAAGGAATTCTCAGTAACCTCAGAGAATATGATCCAATTGAATTTAGAACACACAGGTATCAAACAATTGCCCTCATCTATTGGACTTCAAAGCAAACTTGAAAAGCTACATTTAGGATACACTAACATTGACAACTTACCTGAAAGCATCAAGCACCTTACAAAGCTGAGACATTTAGACTTACAACATTGCAAGGAGCTTCAAACTCTACCAGAGCTTCCCTCATCATTGGAAACACTAAATTCTGCTGGCTGTGTATCACTAGAGACTGTAATGTTCCCTTCAACAGCTATTGAAAAATTGAAGGAAAACAAGAGAAGGGTTGAGTTCTGGAATTGCTTGAAATTGGATGAACATTCTCTGAGAGGTATTGAACTGAATGCACAAATTAACATGATGAGATTGGCACACCAACATGTAACCACAAGTGATCATGATTATGATGCTCAAGACATGTATGTGTATCCAGGAAGCAAAGTTCCAAAGTGGTTGGAATATAGTACAACACATGATCACTTAACTATTGATCTCTCTTCTGCTCCTTATTTCCCTCAATTAGGCTTCATTTTCTGCTTCATTATCCCAGCCATCTCATCAGAGGGTTTGATTTTGAAGTTTAAGATTAGTGATGTTGGTGAAGATGAAAGTATCAAAGTGTACTTGGACAGACCACGCCAAGGAATTGAATTGGATCATGTGTATCTAATGTACCACCAAGGATGTTCTCATTTCCTAAGTAGCAGAGCCAATGATCAGCCAAAGATTACAATTAAGGTTACAGGGGCATCACGAACACTGACATCATCATACGTGCCAGTGCAGTTAAAAGGGTTTGGGGTCAGCCTAGTAACCCCTTCAAAATATCACCAATTTATTCAGCAAATGGAATTGGGTGATAGTAGTATTTTTTCAACAATGTGTTCGGTTGAAGATGAATTTCAATATGCTAAATGA 2010 0.3736 MEYYELAKKMVDYAKGVPLVLKVLGHLLHGKGKDIWKSQSRILKKMQIKEFHNVLRSSYNDLHHNERRIFLDIACFFDGLNLKVNDIKRLLKDRQYSVTMGLERLKDKTLITISQENIVSMHDLIQEMALEIVREESIEDPGRRSRLLDPEDIYEVLKYNKGSEAIRSMVVNMTIIKQLQLSPQVFDKMSNLQFLDIYAKGSHSFIHDDERGLYLPQGLESLPNELRYLRWAYYPLESLPSKFSAEKLVVLILPHSRVKKLWHQVQDLVNLNVLVLCSSTQLMELPDFSKATSLKVIDLRHCVGLTSVHPSVLPLNKLEKLDLSGCISLTSLQSNTHLSSLRSLSLCGCTALKEFSVTSENMIQLNLEHTGIKQLPSSIGLQSKLEKLHLGYTNIDNLPESIKHLTKLRHLDLQHCKELQTLPELPSSLETLNSAGCVSLETVMFPSTAIEKLKENKRRVEFWNCLKLDEHSLRGIELNAQINMMRLAHQHVTTSDHDYDAQDMYVYPGSKVPKWLEYSTTHDHLTIDLSSAPYFPQLGFIFCFIIPAISSEGLILKFKISDVGEDESIKVYLDRPRQGIELDHVYLMYHQGCSHFLSSRANDQPKITIKVTGASRTLTSSYVPVQLKGFGVSLVTPSKYHQFIQQMELGDSSIFSTMCSVEDEFQYAK. 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11693 669 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 356 IPR044974 GO:0006952
Seca4g11693 669 Pfam Leucine rich repeat 365 417 IPR001611 GO:0005515
Seca4g11693 669 SUPERFAMILY "Winged helix" DNA-binding domain 50 158 IPR036390 -
Seca4g11693 669 SUPERFAMILY L domain-like 172 468 - -
Seca4g11693 669 Gene3D Ribonuclease Inhibitor 362 478 IPR032675 -
Seca4g11693 669 Gene3D - 1 63 IPR042197 -
Seca4g11693 669 Gene3D Ribonuclease Inhibitor 156 361 IPR032675 -
Seca4g11693 669 PRINTS Disease resistance protein signature 14 28 - -
Seca4g11693 669 PRINTS Disease resistance protein signature 403 419 - -
Seca4g11693 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 73 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11693 Seca-Chr4 256999439 257010172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11693 3 449 WRKY Transcription Factor Family AT4G12020 36.463 2.32e-66 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11693 - - mtr:11419915 855.514