Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11692 ATGGCCGGTGCGGTAAGAACAGAAATTGCTCTAGCTATAAAGTCTTCAATGATCGACATCCCATTGGTCCAATTAAATAAAGCACAAGAAAGCAAATATGTTATGTATATCGGAAAATTAATGCCTTTCACAGTCGCTTGTCCAGCTAGCCAAAGAACCAAGGCCTTATTTGAAATTAAGCTTAATACAATACTACATGTCATTGGTCGTATTCTCACAGGACTATGCTTCTTCACATTGGTGCTTGGAAGAGCTTGTCAAAAGGGGACTTATGGAGATGCATTTGTTCAACATGAAAATAATTACACTGAGACCCAAGTGCAAATTTGGAGATCTGCTTTGTGGGAATCTGCTAATTTATCAGGATTTCATTCAAAAAATTTTGGAGCAATTAGAAGGTTTGGAACAGGTAGTAGAATCATTGTAACAACCAGAGATAGACATGTGCTTGCTGATCAAGAAGATGATGCTATATACGAGGTTGAGGCATTGGAGTTTGATGAAGCCCTTCAACTTTTCAATTTACATGCCTTTAAACAAAATCAACTTGAAATATTGGAGTACCACGAGCTAACAAAGAAGGTGGTAGATTATGCCAAAGGCATTCCATTACTTCTTAAAGTTTTAGGCCATCTTCTTCGTGGAAAAAATAAAGAAATATGGAAAAGTCAATTGGAGAAACTCAAAAAGATACCAAGCATTGGAAACCGCAGTCGAATATGGGATCCTGATGACATTTATCAAATATTCAAACATAACACGGGGTTTGAGGCCATTAGAAGTATTGTCGTCAACTTGTCACTGATTAAAGAGGTGGAGTTAAATCCTAATAATCTCGTGAACTTAAAGGTGGTTAAAATTTATCTTTCCTTAAACCTGGTGGAGTTGCCAAACTTTTCAAAGACTTCAAATCTTGAAGTAATAATAGTTTATGGTTGCGAAAGGCTGATAGAAGTGCATCCATCTATTTTTTCTCTGGAAAAGCTTAAAATATTGGATCTGAGTTGGTGTAGTTCCCTTACCAGTCTTCCTAGTGATATCCATTTGAGCTCCCTTCGTTATCTCAGCCTTCGTGGTTGCAAAAAACTAAAGGAGTTTGCAATGACATCAGAGAATATGATGGAATTGGATTTGCAATACATGTCCATCAATACATTGCCCTCGTTTATTGGACGTCAAAGCAGACTTGAAAAATTGCATCTAGGAAATTCTGATATTAAAAGCTTAGCTGCAAGTATCAAGCATCTTATGGGGTTGGAATATCTAGACTTGAGGAATTTCTCCAAGCTTCAGACTTTACCAGAGCTTCCCCCATCCATTAAGATATTAAATGCTAATAATTGCACATCATTAGAGAAAGTACTATTCCCAGCAACAACTGTTGAACAACTTTGGGAAACTAAGATGATCGTCATGTTCTGGAATTGCTTGAAATTAGATGAACAATCTCTTAGGGCTATTGGGTTGAATGTGCGAATCAACATTATGAAATTTTCATACCTACATCTATACATTCTAGATCGTGCTTATGTTGAAGATTTTGATGAAGATTATGATATTAAAGGCACGTACGTGTATCCAGGAAGCAGCGTTCCAGAGTGGTTCAAGTACAGGACAACAGAGAACTACATAACAGTTGTTCTCTCTTCTGCTCCAAATTCTCCTCGAATAGGCTTCATTTTTTGCTTCATCATTCCAGAGGTCCCTTTAGATGGTTACCGCTTAAAATTTACAATAAGTGATGGTGAAAACCAAAATGATAGTGTCACTACGCACATGCATAGAGTTCGTTCTGAAATTACAACAAATCATGTTTGTCTATTAGCATGTGCTATTAAAAGGGTTTGGGGTCCACCCAGTAAACCCCTCGGATTATCTCATTTCACTCAATTGATGGAATCATTGGATGATAATATCCCAATTTCATTTAACCAATGCAATTGGGTGACGGAACGAATGAGACGCGTGGGGAAGGATATTCTACTAATTGGCATTGCTATTGCTATTGTAGTCATACTTGGCTTTTATTATATCCTGTATTTACATGGTGATGCAGTTCTTATGCAAATTAGGGCAGCTTCCAGATCCCATGTGGGGAAGACATTGGTGATTGTTTGCGGTCTCTTTTGA 2130 0.3746 MAGAVRTEIALAIKSSMIDIPLVQLNKAQESKYVMYIGKLMPFTVACPASQRTKALFEIKLNTILHVIGRILTGLCFFTLVLGRACQKGTYGDAFVQHENNYTETQVQIWRSALWESANLSGFHSKNFGAIRRFGTGSRIIVTTRDRHVLADQEDDAIYEVEALEFDEALQLFNLHAFKQNQLEILEYHELTKKVVDYAKGIPLLLKVLGHLLRGKNKEIWKSQLEKLKKIPSIGNRSRIWDPDDIYQIFKHNTGFEAIRSIVVNLSLIKEVELNPNNLVNLKVVKIYLSLNLVELPNFSKTSNLEVIIVYGCERLIEVHPSIFSLEKLKILDLSWCSSLTSLPSDIHLSSLRYLSLRGCKKLKEFAMTSENMMELDLQYMSINTLPSFIGRQSRLEKLHLGNSDIKSLAASIKHLMGLEYLDLRNFSKLQTLPELPPSIKILNANNCTSLEKVLFPATTVEQLWETKMIVMFWNCLKLDEQSLRAIGLNVRINIMKFSYLHLYILDRAYVEDFDEDYDIKGTYVYPGSSVPEWFKYRTTENYITVVLSSAPNSPRIGFIFCFIIPEVPLDGYRLKFTISDGENQNDSVTTHMHRVRSEITTNHVCLLACAIKRVWGPPSKPLGLSHFTQLMESLDDNIPISFNQCNWVTERMRRVGKDILLIGIAIAIVVILGFYYILYLHGDAVLMQIRAASRSHVGKTLVIVCGLF. 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11692 709 PRINTS Disease resistance protein signature 199 213 - -
Seca4g11692 709 PRINTS Disease resistance protein signature 324 340 - -
Seca4g11692 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 251 IPR027417 -
Seca4g11692 709 Gene3D - 84 151 IPR035897 -
Seca4g11692 709 Gene3D Ribonuclease Inhibitor 371 479 IPR032675 -
Seca4g11692 709 SUPERFAMILY L domain-like 252 495 - -
Seca4g11692 709 Pfam NB-ARC domain 134 230 IPR002182 GO:0043531
Seca4g11692 709 Gene3D - 163 240 IPR042197 -
Seca4g11692 709 Gene3D Ribonuclease Inhibitor 243 370 IPR032675 -
Seca4g11692 709 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 133 231 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11692 Seca-Chr4 256979623 256988703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11692 128 465 WRKY Transcription Factor Family AT4G12020 25.416 7.09e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11692 - - adu:107464771 330.487