Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11656 ATGGCTTCTCCATTCTATCCCTTGTTATTCTTCTCATCCTTGTTCTTTTTCATTTCTATTTCTGTCTCATCAGACGCTCCACAAACCTTTATCATCCACGTGGCCAAATCAGAGAAGCCTTCCCTTTTCTCCGCCAATCACCACTGGTACTCCTCCATCCTCCGCTCCCTCCCTCGTTCCAATCACGCCACCGATATCATCTACACCTACGACTCCGCCATTCATGGCTTCTCCGTTCGCCTCACCGCCTCTCAGGCCGCCGCACTCCGCCGCCACCCCGGCATCCTCGCCGTGGAGCCCGACCAAATCCGCTACCTCCACACCACACACACCCCTGGTTTCCTTGGCCTCGCTGATAACTTCGGGTTATGGCCCAACTCCCACTACGCCGACGACGTCATCGTCGGAGTTCTCGACACCGGAATCTGGCCGGAGCTCCAGAGTTTCTCCGACGCCGGCCTCTCTGACGTCCCATCTTCCTGGAAAGGCCGCTGCGAAACGAGCCGTGATTTCCCTGCTTCTGCGTGCAACAAGAAGATCATCGGTGCCAGGGCTTTCTACAAAGGCTATGAATCTTATCTAGAAAGACCCATTGACGAAGACACTGAAGGTCATGGAACGCACACTGCTTCCACAGCTGCAGGATCCGTTGTTAAAAATGCTAGCTTGTTCCACTATGCACAAGGTGAAGCCAGAGGAATGGCCACAAAAGCTAGAATTGCTGCCTACAAGATCTGCTGGCAACTGGGTTGTTTTGATTCTGATATTCTCGCTGCTATGGATCAAGCTGTTGCTGATGGGGTTCATGTGATTTCCCTCTCTGTTGGCTCACGTGGGTATCCTCCACAGTACTATCGTGATTCCATTGCTATTGGAGCATTTGGTGCGGCACAGGAAGGTGTTGTTGTCTCTTGCTCTGCTGGGAATTCAGGACCTGGTCCTTATACTGCTGTCAACATAGCACCTTGGATTTTGACCGTTGGTGCTTCAACTATTGATAGGGAGTTTCCTGCGGATGTGGTTCTTGGTGATGGTAGAGTATTTGGTGGGGTGTCTTTGTATTACGGTGATGATTTGCCTGATTTTACACTTCCTTTGGTTTATGCTGCGGATTGTGGAAGCAGATACTGCTACATGGGGTACCTGCAACCGTCCAAAGTTCAAGGGAAGATTGTTGTTTGTGACAGGGGAGGGAATGCCAGGGTTGAGAAGGGAAGTGCAGTGAAGCTTGCTGGTGGATTGGGAATGATTTTGGCGAATACAGAAGAAAATGGTGAGGAGCTTCTTGCGGATGCACATCTTGTGGCAGCAACTATGGTGGGTAGAACTGCTGGAGACAAGATCAAGGAGTATATAAAATTGAGTCAGTATCCAACAGCAACGATAGAGTTTAAAGGGACTGTGATTGGGGGTTCACCTCCTGCCCCTAAAGTTGCTTCCTTTTCTAGCCGAGGTCCAAATTATCGCACATCAGAGATTCTTAAGCCAGATGTTATAGCTCCTGGTGTTAACATTTTGGGACCTACAGATTTGGACATTGATCCTAGGAGAGTTGAGTTTAACATAATATCAGGTACCTCAATGTCATGCCCCCATGTTAGTGGAATTGCAGCATTGCTTAGGAAGGCCTATCCAGATTGGTCACCTGCAGCAATAAAATCTGCTTTGATGACAACGGCTTATGATGTGGATAATTCTGGGGGTAAAATTAAGGATCTTGGAACTGGGAAAGAGTCAAATCCATTCATTCATGGTGCAGGACATGTTGATCCCAACAGGGCTCTCAATCCTGGGTTGGTTTATGATTTGGATAGTAATGACTATTTAGCATTCCTATGCTCAATTGGGTATGATGCTGAGCGAATTGCGGTTTTCACTAGAGGGCCTGCTAGTTTGGACATTTGGAGTTTGACTAGTCCGGGTGATTTGAATTACCCATCTTTCTCTGTGGAGTTTGGTGCCAACAATGGTTTGGTTAAGTATAAAAGGGTTGTTACTAATGTGGGAAGCTCAGCTGATGCTGTTTACACTGTTAAAGTGAATGCTCCTACTGGTGTTGATGTCAGTGTTTCCCCTAGCAAGCTTGTTTTCAGTGCTGAAAACAAGACACAAGCCTTTGAGGTCACATTCACTAGAGTTGGGTATGCTGGTTCTCAGGGTTTTGGGTCCATTGAGTGGACTGATGGAAGTCACCATGTGAGGAGCCCAATTGCTGTTAGATGGAGCAGTGGATCCTCATCATCCATTTGA 2250 0.4791 MASPFYPLLFFSSLFFFISISVSSDAPQTFIIHVAKSEKPSLFSANHHWYSSILRSLPRSNHATDIIYTYDSAIHGFSVRLTASQAAALRRHPGILAVEPDQIRYLHTTHTPGFLGLADNFGLWPNSHYADDVIVGVLDTGIWPELQSFSDAGLSDVPSSWKGRCETSRDFPASACNKKIIGARAFYKGYESYLERPIDEDTEGHGTHTASTAAGSVVKNASLFHYAQGEARGMATKARIAAYKICWQLGCFDSDILAAMDQAVADGVHVISLSVGSRGYPPQYYRDSIAIGAFGAAQEGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFPADVVLGDGRVFGGVSLYYGDDLPDFTLPLVYAADCGSRYCYMGYLQPSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGMILANTEENGEELLADAHLVAATMVGRTAGDKIKEYIKLSQYPTATIEFKGTVIGGSPPAPKVASFSSRGPNYRTSEILKPDVIAPGVNILGPTDLDIDPRRVEFNIISGTSMSCPHVSGIAALLRKAYPDWSPAAIKSALMTTAYDVDNSGGKIKDLGTGKESNPFIHGAGHVDPNRALNPGLVYDLDSNDYLAFLCSIGYDAERIAVFTRGPASLDIWSLTSPGDLNYPSFSVEFGANNGLVKYKRVVTNVGSSADAVYTVKVNAPTGVDVSVSPSKLVFSAENKTQAFEVTFTRVGYAGSQGFGSIEWTDGSHHVRSPIAVRWSSGSSSSI. 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11656 749 ProSiteProfiles Serine proteases, subtilase domain profile. 111 595 - -
Seca4g11656 749 FunFam subtilisin-like protease SBT1.5 333 469 - -
Seca4g11656 749 FunFam Subtilisin-like protease SBT1.5 132 345 - -
Seca4g11656 749 SUPERFAMILY PA domain 360 450 IPR046450 -
Seca4g11656 749 Gene3D Peptidase S8/S53 domain 132 608 IPR036852 GO:0004252|GO:0006508
Seca4g11656 749 FunFam Subtilisin-like protease SBT1.9 18 107 - -
Seca4g11656 749 Pfam Fibronectin type-III domain 642 739 IPR041469 -
Seca4g11656 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Seca4g11656 749 SUPERFAMILY Protease propeptides/inhibitors 27 106 - -
Seca4g11656 749 Gene3D - 612 741 - -
Seca4g11656 749 Pfam PA domain 363 448 IPR003137 -
Seca4g11656 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 107 IPR037045 -
Seca4g11656 749 CDD PA_subtilisin_like 339 462 - -
Seca4g11656 749 FunFam Subtilisin-like protease SBT1.5 612 742 - -
Seca4g11656 749 Pfam Subtilase family 131 566 IPR000209 GO:0006508|GO:0008236
Seca4g11656 749 CDD Peptidases_S8_3 105 561 IPR034197 -
Seca4g11656 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 739 IPR045051 -
Seca4g11656 749 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Seca4g11656 749 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Seca4g11656 749 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Seca4g11656 749 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Seca4g11656 749 SUPERFAMILY Subtilisin-like 106 599 IPR036852 GO:0004252|GO:0006508
Seca4g11656 749 Gene3D - 333 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11656 Seca-Chr4 256399879 256402197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11656 6 749 Subtilisin-like Serine Gene Family AT3G14067 65.410 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11656 - - gmx:100793990 1205.66