Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11653 ATGAAAGCACTAAATAGGTTATTCGGTTCAAGACGCAGAAAGCTTCGTGGGGTTTTCAATGGCTTGTGTGCTATGGTTGTGTTTTTCTTCTTCTACAACAGGGAAGACATCATACGTAATCCGATTCTTAGGCAATCCGCATATTTGGTGAATCATCGTTTGCCTCAAAATGCAATTTTGAAAGATGGGGTTTCTGTGATTCACCGTCGAATGGTTGAGATCAGCCCCAACACTTCAATTGTAGCTGGTGAGCCTCGTGACGAAGATTTAGCTATAAAAAGGCCTGGACTGTGTGTTGAATTGCTCCACCACGATGGTTATGCTAGCCCCTGTGAATTCTTAAAGGCCAATCCTCAGTGCTCTTCTGAGGGGTATCTTGATTATTTGACGTTTTTCTATTGTAAATGTCAAAATTTTAGAGTGCTTGGTTATCTAGTATTAGGTTTATGGGGTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCAGCAGACTACTTTTGCCCTTCTCTTGAGCATCTCTCAAGGCTCTTGAAATTGCCTCCAACTGTGGCTGGGGTTGTGCTGCTTCCACTTGGGAATGGGGCACCTGATGTGTTTTCCAGTATAGCTTCCTTTGTAGGTACTGAAACAGGGGAAGTGGGTCTTAACAGCGTGTTAGGCGGTGCTCTATTTGTTACCACTGTTGTTGTTGGAACTGTTTGTCTGTGTGTTGCGGAGAGGGGGATTCAAATTGATCGAAGATGCTTTATCAGGGACGTGAGCTTCTTTCTACTCACTCTTGCTTCTCTGTTATTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGGCAGCCATTGCCTTTGTATCGATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATACTACGGAAACATGCACATAGGCTGAAATTGGATGCTGTCACACCATTGCTTCCTGTCCAGGGAAATGTGTTCTCTCTAGGTTCTGAAGAGGATGCTTCTATCTATAGCTCTTTGCTTGACTTAGACACTGAAAGTGATCCTCCTCGTCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAACCAGGCAAATAAAATCAATTTTTTAGATGATGAAAGGCCTCCTTGGGGATGGAGTGATGAGCCCACAGAAAACACTAGGTTCTCATTCTCTGTTTCAAAACTTTTTTTACTGATGGAGATTCCACTGGCAATTCCTAGACGGCTAACAATTCCAATGGTCAATGAGGAAGTATGGTCAAAGCCATATGCTATGGCCAGTGCTACATTGGCTCCCATTCTCCTGGCCTTTTTGTGGAGTACCCAAGATGATGTGAGTTATAAGAGTACTATACTTGCTTATTGTTTTGGTGTTACTGTTGGATGCACACTTGGTATTCTTGCATATAAATACACAGTGCCTGATCATCCACCTCCTCAGTATTTGATTCCCTGGGTTCTTGGAGGATTCCTCATGAGTATAGTGTGGTTCTACATAATAGCAAATGAGCTTGTGGCTCTATTAGTAGCATTTGGTGTAATTTTTGGAATTAATCCATCCATCCTGGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTTGCATTGGCATTGGAGGGTGCAGATGGCGTTCAGATTGCTTTGTCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCCTTGCTGCTTGGGGCCTGGTCAAAGAAACCTTCTTTGTACGTGTTGCCGAAAGATGGTAGCTTATTTTACACCATGGGTTTTCTGATCACAGGACTGCTATGTGCACTTGTTGTTTTACCACGCAACAACATGCATCCTAACAGAATATTAGGAATGGGTCTCATAACCCTTTATTTGCTATTTCTTTCTTTCAGAGTGTGCACTGCTATGGGGCTAATAACTGTTGCTGGTTTAAGTTGA 1965 0.428 MKALNRLFGSRRRKLRGVFNGLCAMVVFFFFYNREDIIRNPILRQSAYLVNHRLPQNAILKDGVSVIHRRMVEISPNTSIVAGEPRDEDLAIKRPGLCVELLHHDGYASPCEFLKANPQCSSEGYLDYLTFFYCKCQNFRVLGYLVLGLWGAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFSSIASFVGTETGEVGLNSVLGGALFVTTVVVGTVCLCVAERGIQIDRRCFIRDVSFFLLTLASLLLILVVGKVGVGAAIAFVSIYVVYAFIVAANEILRKHAHRLKLDAVTPLLPVQGNVFSLGSEEDASIYSSLLDLDTESDPPRLPPSLPQWMWSSNVAIYSNQANKINFLDDERPPWGWSDEPTENTRFSFSVSKLFLLMEIPLAIPRRLTIPMVNEEVWSKPYAMASATLAPILLAFLWSTQDDVSYKSTILAYCFGVTVGCTLGILAYKYTVPDHPPPQYLIPWVLGGFLMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALALEGADGVQIALSGCYAGPMFNTLVGLGISLLLGAWSKKPSLYVLPKDGSLFYTMGFLITGLLCALVVLPRNNMHPNRILGMGLITLYLLFLSFRVCTAMGLITVAGLS. 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11653 654 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 20 648 - -
Seca4g11653 654 Pfam Sodium/calcium exchanger protein 489 640 IPR004837 GO:0016020|GO:0055085
Seca4g11653 654 Pfam Sodium/calcium exchanger protein 149 291 IPR004837 GO:0016020|GO:0055085
Seca4g11653 654 FunFam Cation/calcium exchanger 5 426 642 - -
Seca4g11653 654 Gene3D - 426 642 IPR044880 -
Seca4g11653 654 Gene3D - 179 312 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11653 Seca-Chr4 256379034 256381517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11653 98 646 Antiporters AT5G17850 42.599 1.07e-123 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11653 K13754 - gmx:100796101 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11653 4 256379034 256381517 Seca4g11653 4 256379034 256381517 ECH