Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11652 ATGTCTGCAACTATGATCAGTGACCCTATGGTTATATCGGCACCAGAAACTCAACCAGCAGCAACTAGTAGCATACTAGTTTCACAGAGTGAAGTTGAATTCGCCATCTGTGATTGCTGTGGCCTATCAGAAGAATGCACACCAGCTTATATAGAAAGAATCAGAGAGCGCTATCATGGGAAATGGGTTTGTGGGTTATGTGCTGAGGCTGTTAAGGATGAAATTGTGAGGTCTGAGAGGCTTGTTAGCACAGAAGAAGCAATGACAAAGCATATGAACTTCTGCAAAAAGTTCAACACTTCAGGGCCTCCTCCAAACCCAACAGTGCATTTGATATCAGCTATGAGACAGATTCTTAGGAGGAGTTTGGATTCTCCTAGAGTAAGGTCCACACCAAGTAGTCCAACTAAGACTAATAGAGAAATTCGTGGTTCTGGACTTGCAAGGTCTGAGAGCTGCTTCTCTACTCTTTCTGGTTCCTGA 483 0.4369 MSATMISDPMVISAPETQPAATSSILVSQSEVEFAICDCCGLSEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMTKHMNFCKKFNTSGPPPNPTVHLISAMRQILRRSLDSPRVRSTPSSPTKTNREIRGSGLARSESCFSTLSGS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11652 160 PANTHER OS01G0745000 PROTEIN 24 158 IPR012876 -
Seca4g11652 160 MobiDBLite consensus disorder prediction 124 160 - -
Seca4g11652 160 Pfam Protein of unknown function (DUF1677) 32 121 IPR012876 -
Seca4g11652 160 MobiDBLite consensus disorder prediction 123 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11652 Seca-Chr4 256372752 256373234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11652 - - lja:Lj3g3v2576730.1 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01165 4 18631296 18631727 Seca4g11652 4 256372752 256373234 ECH
Seca4g11652 4 256372752 256373234 Seca4g11652 4 256372752 256373234 ECH
Seca4g11652 4 256372752 256373234 Seca4g01164 4 18615728 18617116 ECH
Seca4g11652 4 256372752 256373234 Seca8g03335 8 95636192 95636614 ECH