Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11643 ATGGAGCCACCGGAGAGCCTGCCGTTGGAAGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACCGCGTCGGAGGAAGCCCGTGAGAAGATGATATTCGACGGTGACCGTGAAGAGGTGGATCTCTACCTCCAAGCCGTTGATGAAATCCAACGGTCCATGTCCTCTGCTTCTCTCTCCGATGAACAGAGCAAGGTCAGTTCCGCCATCCAGATCGCCATGGCTCGCTTGGAAGATGAGTTTCGTAACATCCTCATCTCTCACACCAACCCCATCGACCCCACTTTCCCCTTTCACCATCCAAACCCTGAAGAAGACGAAGATCAACACCACCACTCTGTTTCTTCTTCATCAACACCTAAAAAACAGGACAATGATAATAATGATGATGATGATGGTGATGTTGAGGACAAGCTTCTTCGCTTTGACAGTGGAAGTTCCACTGTTTCTGCTTCTTCTTCCAGCCTCCGTAGTAGCTACCGTTCCACTAGCAGCATCCGTGAGATCGATCTGATACCCTCTGATGCTGTTTCTGACCTTCGTTGCATCGCTGAGAGAATGATCTCTTCTGGTTACTTGCGTGAGTGCATCCAGGTTTATGGTAGCGTGAGGAAATCCGCTGTGGATGCAAGTTTTCGGAGGCTTGGTGTTGAGAAGTTGAGCATCGGTGATGTTCAGAGGTTGGAGTGGGAACAGCTTGAGGCCAAGATCAGGCGTTGGATAAGAGCTGCTAAGGTCTGTGTTAGGACCTTGTTTGCTAGTGAGAAGAGGCTCTGTGAGCAAATCTTTGATGGGGTTGGAACTGCTATTGATGATGCTTGTTTCATGGAGACTGTGAAGGGACCTGCTATTCAGCTTTTCAACTTTGCTGAAGCCATCAGCATAAGCAGAAGGTCACCTGAGAAACTGTTCAAGATTCTAGACCTGCATGATTCTTTGATGGATTTGATACCTGATATTGATATTGTGTTTGACTCTAAGTCTTCTGAGTCAATTCGTGTTCAGGCTGCTGAGATTCTTTCAAGGTTGGCTGAGGCTGCAAGAGGGATTTTATCAGAGTTTGAGAATGCTGTGCTTAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACAAGGTATGTGATGAATTATATAAGTTTGATCTCTGATTACAAACAGACTATGAATGAGCTTATAGTGTCTAAGCCATCAACTGGGTCTAGATATTCTGGTGATCCTTCAACCCCGGATATGGATTTTACTGAGTTGGAAGGGAAGACCCCTTTGGCTATTCACTTGATTTGGATTATTGTTATATTGCAATTTAACTTGGATGGCAAGGCCAAGCATTATAAGGATGCATCCTTGTGTCACTTGTTCATAATGAACAATGTGCACTACATTGTTCAGAAGGTTAGAGGGTCTCCTGAATTGAGGGAGATGATTGGAGATGATTATTTGAAGAAGCTGACAGGGAAATTCAGGCAAGCTGCTACTAGCTACCAGAGAGCAACATGGGTGAGGGTGTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGTGGTGGCTTTTCTTCTGGGGTCTCAAAGAGTGCTTTGAGAGAAAGGTTTAAGGCCTTCAATGCTATGTTTGAGGAGGTTCATAGGACTCAAGCTGTATGGTTGATACCAGATTCACAACTCAGGGAGGAGCTTCGGATATCTATATCAGAGAAGCTGATCCCAGCATATAGGTCATTCTTTGGGAGGTTCAGGAGTCACATAGAGAGTGGAAGGCATCCAGAGAACTACATGAAGTATTCTGTTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATTCCTGTTTCCCAGCACTTGAGGAGGAGATCTCAATGA 1878 0.4585 MEPPESLPLEAAEKIILRWDSTASEEAREKMIFDGDREEVDLYLQAVDEIQRSMSSASLSDEQSKVSSAIQIAMARLEDEFRNILISHTNPIDPTFPFHHPNPEEDEDQHHHSVSSSSTPKKQDNDNNDDDDGDVEDKLLRFDSGSSTVSASSSSLRSSYRSTSSIREIDLIPSDAVSDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDSLMDLIPDIDIVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTMNELIVSKPSTGSRYSGDPSTPDMDFTELEGKTPLAIHLIWIIVILQFNLDGKAKHYKDASLCHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFFGRFRSHIESGRHPENYMKYSVEDLEDAVLDFFEGIPVSQHLRRRSQ. 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11643 625 Pfam Exo70 exocyst complex subunit 239 607 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca4g11643 625 SUPERFAMILY Cullin repeat-like 26 612 IPR016159 -
Seca4g11643 625 MobiDBLite consensus disorder prediction 99 138 - -
Seca4g11643 625 Gene3D Exocyst complex component Exo70 102 621 - -
Seca4g11643 625 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 613 IPR004140 GO:0000145|GO:0006887
Seca4g11643 625 MobiDBLite consensus disorder prediction 92 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11643 Seca-Chr4 256294582 256296459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11643 9 625 EXO70 exocyst subunit family AT1G72470 69.984 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11643 K07195 - gmx:100808671 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11643 4 256294582 256296459 Seca4g11643 4 256294582 256296459 ECH