Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11629 ATGTCTGTAGAAACAGATCATCATTTGGGCATGGAGGAGGGAGAGACCAAAGCAGAAAAGAGCCTCAAAGACCGAAAGGTATCATGGCCAAAGCTCCACCGCTTAGACTCTCTCAATTTGGAAGCTGGAAGACTTTCCTTCTCTGCAAACCACTCCTCCAATTTGGGCTGGAGGACTACTCTGAGTTTAGCATTTCAATGCTTGGGCGTTGTATATGGTGACCTTGGCACATCTCCACTTTATGTGATATCAAGTACTTTCACAAACGGTATTGGTAACAAAGAAGACATCCTTGGAGCCTTGTCTCTCATAATCTACACCATTGTCTCTTTGCCCTTGATCAAATATGTCTTCATCGTACTATATGCTAACGACAATGGTTGCGGTGGAGCGTTGGCACTCTATTCATTGCTCTGTAGGCATGTGAAGTTAAGTTTGATTCCAAATCAACAACCAGAGGACAAGGAGCTTTCTAATTACAAACTCGAAACACCATCTAACAAGGTGAAAAGAGCCCAAAAGCTAAAGCACAAGCTTGAGAATAGTTATTTTGCTCGGGTTATGCTTTTGCTCATAACCATATTGGGAACAACCATGGTTATAGGGGATGGGATTTTTACTCCAGCAATGTCAGTTCTTTCTGCAGTGAGTGGGGTCAGCACCTCGTTGGGTCAAGATGCTGTTGTGGGGATCACTATAGTGATATTGGTCATCCTTTTTTCTATGCAACGATTTGGTACTGACAAAGTAGGATTTTCATTCGCTCCAATTATCTTGGTGTGGTTTTTATTAATTGGAGGAACTGGACTCTACAATGTGTTCAAGCATGACATTGGAGTATTACGTGCTTTTAATCCAAAATATATTGTTGAATACTTCCAACGGAATGGTAAACATGGATGGATATCACTTGGTGGAATCTTTCTGTGCATCTCAGGATGTGAGGCCATGTTTGCTGACTTGGGTCACTTTAATGTGCGAGCCATTCAAATTAGCTTCTCTTTTATTACATTTCCTGCAATATTGGCCGCATATTGTGGACAAGCAGCATATCTACGAAAGTTCCCTGAGAAAGTGTCTAATGTTTTCTATGCATGTATACCTGAGCACTTATATTGGCCAACATTTGTTGTTGCTGTTGCTGCTTCCATCATAGCCAGCCAGGCAATAGTTTCAGGAGCATTTTCCATTGTATCACAGGCCCTAAATTTGGGTTGTTTCCCAAGTGTTAAGGTTGTGCATACTTCCCCTAAGCATGAGGGTCAGGTCTATATTCCTGAGCTCAACTACATGTTCATGATAGCATGTATTGCGGTCAGTGTTGCCTTCAGGACCTCAGAACAACTTGCTCATGCATATGGGATTGCAATAGTTTGTGATATGACAATCACAACATTCCTAGTTTCCTTTGTAATGTTGGTGGTATGGAAGAAAAGCATATGGTTGGTTTCTCTCTTCTTTGTGCCATTTGGTTGCATTGAGCTTGTTTATCTTTCAGCACAACTAACCAAGTTTACAGAAGGAGGTTTCCTTCCTCTTGTAACTGCTTTCTTCATAACTATGGTCATGGGAACCTGGTATTATGCACAAAAGGAAAGATACATGTTTGAACTGAAGAACAAGGTTTCCACTGAGTATGTGAGAAAACTAGCCAACGACATAAACATAAAGCGTGTCCCTGGAATTGGATTTCTGTATTCTGAACTTGTACAAGGCATTCCTCCCATATTCCCTCACTTCATTGACAACATACCATGTATCCATTCAGTTGTTGTGTTTGTTTCCATTAAGGCAATTCCTATTAGTACAGTTGCATTGGAAGAAAGGTTTCTGTTTAGACAGGTGGAGCCAAGAGAATACAGAATATTTCATTGTGTTGTGAGGCATGGTTATAGAGATGTGGTTGGAGATCCTTTGGAGTTTGAGTCCCAGTTACTACAACAACTGAAGGAATTTATTAGACAAGAAAGCTTGATGCTTGGTGTTGAGGGACCAACAACTGAACAAGTACCTATTTCAACCAATGAGAGTGATGAGATCCCAGATCAGGGTTCCATTCAAACATTGGGTGTTGAAACTGAGATAAAATTTATTGATAAGGCAATGGATCAGAAGGGTGTGGTGTATCTGCTAGGGGAAACAGAGGTAGTGGCAGATCCAAAGTCATCTATCTTCAATAAGATAGTTGTGAACTATGGTTATAGCTTTCTGAGAAGGAACTTTCGGCAAAGGGATAAATTGATGGCAATCCCTCGCAAGAGACTTGTTAAGGTTGGAATGACATATGAAATATGA 2295 0.4083 MSVETDHHLGMEEGETKAEKSLKDRKVSWPKLHRLDSLNLEAGRLSFSANHSSNLGWRTTLSLAFQCLGVVYGDLGTSPLYVISSTFTNGIGNKEDILGALSLIIYTIVSLPLIKYVFIVLYANDNGCGGALALYSLLCRHVKLSLIPNQQPEDKELSNYKLETPSNKVKRAQKLKHKLENSYFARVMLLLITILGTTMVIGDGIFTPAMSVLSAVSGVSTSLGQDAVVGITIVILVILFSMQRFGTDKVGFSFAPIILVWFLLIGGTGLYNVFKHDIGVLRAFNPKYIVEYFQRNGKHGWISLGGIFLCISGCEAMFADLGHFNVRAIQISFSFITFPAILAAYCGQAAYLRKFPEKVSNVFYACIPEHLYWPTFVVAVAASIIASQAIVSGAFSIVSQALNLGCFPSVKVVHTSPKHEGQVYIPELNYMFMIACIAVSVAFRTSEQLAHAYGIAIVCDMTITTFLVSFVMLVVWKKSIWLVSLFFVPFGCIELVYLSAQLTKFTEGGFLPLVTAFFITMVMGTWYYAQKERYMFELKNKVSTEYVRKLANDINIKRVPGIGFLYSELVQGIPPIFPHFIDNIPCIHSVVVFVSIKAIPISTVALEERFLFRQVEPREYRIFHCVVRHGYRDVVGDPLEFESQLLQQLKEFIRQESLMLGVEGPTTEQVPISTNESDEIPDQGSIQTLGVETEIKFIDKAMDQKGVVYLLGETEVVADPKSSIFNKIVVNYGYSFLRRNFRQRDKLMAIPRKRLVKVGMTYEI. 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11629 764 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 55 763 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca4g11629 764 Pfam K+ potassium transporter 64 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca4g11629 764 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g11629 764 NCBIfam potassium uptake protein 63 764 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11629 Seca-Chr4 256117789 256122041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11629 6 764 Inorganic Solute Cotransporters AT4G13420 55.102 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11629 K03549 - gmx:100798735 1098.96