Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11613 ATGGGAGGAAGAGCAAGCAGGTTAAGGAAATGGGTTGGTGTTGGCGGTGCTCACAAGCGTATTGAAGGCCCTGTTTTGGCACCTAGAGGGTATGTCCCAATCTGTGTTGGCACAAATGAGGATACTTGTAGGCGATATATGGTTCACACCAGAGCACTTGGTGATGCTTTTTTCTGCGAATTGCTGGGTAGGTCTGCAGAGGAATATGGGTTTAGGAATGAAGGGGTTCTGAGGATCCCATTCGAAGTACGAGATTTTGAAGAGTGGTTCATTAGACGGTCCAACAGAAGGATTAAAATTAAGAGGATCGGAGGGTAA 318 0.4654 MGGRASRLRKWVGVGGAHKRIEGPVLAPRGYVPICVGTNEDTCRRYMVHTRALGDAFFCELLGRSAEEYGFRNEGVLRIPFEVRDFEEWFIRRSNRRIKIKRIGG. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11613 105 Pfam Auxin responsive protein 27 88 IPR003676 GO:0009733
Seca4g11613 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11613 Seca-Chr4 255979241 255979558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11613 22 86 Calmodulin-binding Proteins AT3G43120 40.000 2.32e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11613 K14488 - gmx:102666083 139.813