Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11612 ATGGCCAAAGTTGGAAAGCTAACAAAGCTGAAGTCAGCTATGAAGAGATGGCCCTCATTGACAAAGCTGAGCCGCAACAACAGCTGTGTCTCTCCCAATTCCAACAAAGAAGAAGGCGGTGCCACAACCCCTTCCTTCAAGGAACTGCATGCTGTCTATGTTGGCAAGTCAAGGAGGCGCTACCTTGTGAGCTCTGATGTGATCCATCACCCTGTGTTTCAGGAACTTGTGGACAGGTCTTCCACCTCTGCTGACTGTGATGATGGGGTTGTTGTTTCCTGTGAGGTGGTTCTGTTTGAGCATTTGCTGTGGATGCTTGAGAGCTCTGAGACTCAGCTGGGGTCCATGGATGAGCTGGTTGAGTTCTACACTTGTGCATGCTAG 384 0.5 MAKVGKLTKLKSAMKRWPSLTKLSRNNSCVSPNSNKEEGGATTPSFKELHAVYVGKSRRRYLVSSDVIHHPVFQELVDRSSTSADCDDGVVVSCEVVLFEHLLWMLESSETQLGSMDELVEFYTCAC. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11612 127 Pfam Auxin responsive protein 16 106 IPR003676 GO:0009733
Seca4g11612 127 MobiDBLite consensus disorder prediction 23 41 - -
Seca4g11612 127 PANTHER EXPRESSED PROTEIN 32 124 - -
Seca4g11612 127 MobiDBLite consensus disorder prediction 23 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11612 Seca-Chr4 255972297 255972680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11612 1 121 Calmodulin-binding Proteins AT3G43120 22.819 6.89e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11612 - - gmx:100797158 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11612 4 255972297 255972680 Seca4g11612 4 255972297 255972680 ECH