Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11611 ATGGGTCAATGCAACATAGGAGGGTTAGCACTCCTCATTTGCATGATTGTTTCATTGATGTTCATACACAGATGGAGTCAAAGGAACAAGAAAGGCCCCAAAACTTGGCCATTTCTTGGAGCTGCCATTGAACAATTCATAAACTATGATAGGATGCATGATTGGCTTGTCCAATATTTGTCCAAGTCTAAAACTGTTGTGGTCCCTATGCCATTCACAACTTACACATACATTGCTGATCCTGCTAATGTGGAACATGTTCTTAAGACCAACTTCAGTAATTATCCAAAGGGTGAAGTGTACCATTCATATATGGAAGTGTTGCTTGGAGATGGGATATTTAATGCTGATGGTGAGCTTTGGAAGAAACAGAGGAAAACTGCAAGTTTAGAGTTTGCATCTAGGAATTTGAGGGATTTCAGCACCAAAGTTTTCAGGGAGTATGCCTTAAAACTCTCTTCCATTCTCAATCAAGCATCTCTCCTTAACCAAGAAATAGACATGCAGGAGTTGTTGATGAGAATGACTTTAGACTCCATATGTAAGGTGGGGTTTGGAGTGGAAATTGGAACATTGGCTCCTGATTTACCAGACAATCATTTTGCTCATGCCTTTGATAAAGCAAACATCATAGTAACACTTCGCTTCATTGATCCACTATGGAAAATTAAGAAATTTCTAAATATAGGCTCAGAAGCACAACTTGACAAAAGCATCAAAGTCATTGATGATTTCACTTACTCTGTAATTCAGAGAAGGAAGGTAGAGATAGAGGATGTTAAAAAGAGTGGCCAACAAAATCAGATAAAACATGATATATTATCAAGATTCATTGAGTTGGGAGAAAGTAATGCTACAGATAAAATTTTGAGAGATGTTGTCTTAAACTTTGTAATTGCTGGTAGAGACACAACTGCAACAACTCTATCATGGGCCATATATATGCTAATGACACATGCTCATGTTGCTGATAAACTTTACCTAGAGCTCAAAACTTTTGAGGAGAATCTAGCAAAGGAAGAGAACATTTCCTTGCTTCAATGTGACAAAGAGGACCCTGAATCATTCAATCAAAGAGTAGAACAATTTGCAAGGTTATTGAATAAAGATTCACTAGAGAAACTGTGCTATTTACATGCAGTCATAACAGAGACTTTAAGATTGTATCCAGCTGTTCCTCAGGATCCCAAAGGCATCTTGGAGGATGATGTCTTACCTGATGGTACCAAAGTAAAAGCAGGAGGCATGGTAACTTATGTTCCATACTCCATGGGAAGGATGGAGTATAATTGGGGGCCTGATGCAGCTTCATTTATACCTGAGAGATGGTTTAAGGATGGTGTTCTTCGAAATGAATCTCCATTCAAATTCACTGCTTTTCAGGCAGGGCCAAGAATATGCCTTGGCAAGGACTCTGCATATCTCCAAATGAGGATGGTACTTGCTATTCTGTGCAGATTTTACAAATTCAAATTGGTGCCTGGTCATCCAGTGAAATACAGGATGATGACTATATTATCAATGGCATATGGTTTAAAGCTTACCATAGAGAAACGTTCTTGA 1563 0.3845 MGQCNIGGLALLICMIVSLMFIHRWSQRNKKGPKTWPFLGAAIEQFINYDRMHDWLVQYLSKSKTVVVPMPFTTYTYIADPANVEHVLKTNFSNYPKGEVYHSYMEVLLGDGIFNADGELWKKQRKTASLEFASRNLRDFSTKVFREYALKLSSILNQASLLNQEIDMQELLMRMTLDSICKVGFGVEIGTLAPDLPDNHFAHAFDKANIIVTLRFIDPLWKIKKFLNIGSEAQLDKSIKVIDDFTYSVIQRRKVEIEDVKKSGQQNQIKHDILSRFIELGESNATDKILRDVVLNFVIAGRDTTATTLSWAIYMLMTHAHVADKLYLELKTFEENLAKEENISLLQCDKEDPESFNQRVEQFARLLNKDSLEKLCYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFIPERWFKDGVLRNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFKLVPGHPVKYRMMTILSMAYGLKLTIEKRS. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11611 520 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 FunFam Alkane hydroxylase MAH1 26 520 - -
Seca4g11611 520 SUPERFAMILY Cytochrome P450 22 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PANTHER CYTOCHROME P450 20 512 - -
Seca4g11611 520 CDD CYP86A 64 512 - -
Seca4g11611 520 Coils Coil 323 343 - -
Seca4g11611 520 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 Gene3D Cytochrome P450 17 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11611 520 Pfam Cytochrome P450 32 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11611 Seca-Chr4 255965082 255968010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11611 8 520 Cytochrome P450 AT1G69500 75.526 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11611 K20495 - gmx:100787802 946.036