Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11597 ATGGAGAGTTACCTGAATGAGAATTCCGGGGATGTGAAGCCCAAAAACTCATCGGATGAAGCGCTTCAGAGATGGAGGAAGCTCTGTTGGCTTGTTAAGAACTGCAAGAGGAGGTTTCGTTTCACTGCTAATCTCTCCGAGCGATTTGAAGCTGAGGCTATTAGACGCTCCAATCAGGAGAAATTCAGAGTCGCAGTGTTCATCTCAAGCTTACTCTCATCCTTCTACTCGACTTGA 237 0.4641 MESYLNENSGDVKPKNSSDEALQRWRKLCWLVKNCKRRFRFTANLSERFEAEAIRRSNQEKFRVAVFISSLLSSFYST. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11597 78 Gene3D - 17 76 - -
Seca4g11597 78 FunFam Calcium-transporting ATPase 17 77 - -
Seca4g11597 78 MobiDBLite consensus disorder prediction 1 20 - -
Seca4g11597 78 Pfam Ca2+-ATPase N terminal autoinhibitory domain 7 49 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11597 Seca-Chr4 255834336 255834572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11597 1 78 Primary Pumps ATPases AT1G27770 80.769 6.70e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11597 K01537 - tcc:18591987 130.568