Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11594 ATGGCTCCATTTCCCTCTCTCATTTTCTTATTCTTCACTGCCACACTCTCACTACTACCTTCTTCATTTTCCTCTTCTTCTTCTGACCCAGAAAGTAAAACCTTCATAATCCAAGTCCACCATGACGCCAAGCCTTCCATTTTCCCAACCCATAAGCACTGGTACGAGTCCTCCCTCTCCTCCATTTCCTCCACCAACCCCATCATCCACACTTACGACACCGTTTTCCACGGTTTCTCTGCAAAGCTCTCACCTTTAGAGGCCCAGAAGCTGCAATCACTCTCCCACGTCATCACCCTCATTCCAGAACAAGTTCGCCACCTCCACACCACGCGTTCCCCTCAGTTTCTCGGTCTCAAAACCGCCGACAGAGCCGGGTTGCTCCACGAGACTGATTTCGGGTCGGATCTCGTCATTGGAGTCATCGACACCGGAATCTGGCCTGAGAGACAGAGCTTCAACGACCGCGACCTGGGTCCCGTTCCTGCCAAATGGAAGGGCCAGTGCGTCGCCGGGAAAGGCTTTCCGGCGAGCTCCTGCAACCGGAAACTCATCGGAGCACGGTATTTCTCGGCCGGGATGAACGAGACGACGGAATATCGTTCTCCGAGGGACTCCGACGGCCACGGGACGCACACTGCGTCGATCGCTGCCGGAAGGTACGTGTCGTCGGCGTCCACATTGGGTTACGCTAAAGGAGTCGCCGCCGGCATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAGGTGTGCTGGACTGGCGGTTGCTACGACTCCGACATCCTCGCGGCGTTCGACGCCGCCGTCTCCGACGGCGTCGACGTGGCCTCCCTCAGCGTCGGAGGTGTGGTGGTGCCGTACCACCTCGATGTCATTGCCATAGGTGCTTTTGGAGCCTCAAGCGCCGGCGTTTTTGTCTCTGCCTCCGCCGGCAACGGCGGTCCCGGCGGCCTTACCGTCACCAATGTGGCACCTTGGGTGACCACTGTGGGTGCTGGAACCATAGACAGAGATTTCCCTGCTGATGTGAAGCTTGGAAATGGTAAGATTATACCTGGGGTTAGTATTTATGGTGGGCCGGGTCTAACTCCGGGTCGGATGTACCCGGTTGTGTATGCGGGAGGGGGTGATGGTTATTCTTCTTCACTTTGCTTAGAAGGTTCATTGGATCCTAAGTTTGTAAAGGGCAAGATTGTTGTGTGTGATAGGGGCATTAATTCAAGAGCTGCCAAAGGTGAAGTGGTGAAAAAAGCTGGTGGAATTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTAGTGGCTGATTGCCACGTGTTGCCGGCTACCGCCGTCGGTGCTAGCGGCGGAGATGAAATCCGGAGTTACATTGCAGCAGGGGCTAAATCAAGGTCACCACCCACTGCCACTATTGTGTTTAAAGGTACTAGGCTTGGGGTTAGGCCAGCACCTGTTGTGGCATCATTTTCTGCTAGAGGGCCTAATCCTGAATCCCCTGAGATTTTGAAGCCAGATGTTATAGCACCTGGATTGAACATACTTGCTGCTTGGCCTGATAGAGTTGGACCTTCTGGGGTTCCTTCTGATGGGCGTAGGACTGAGTTTAACATACTTTCTGGGACTTCAATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCTCATCCAGTTTGGAGTCCTGCTGCTATTAGGTCAGCTCTTATGACCACTGCTTATACTGTGGATAATAGGGGTCATACCATGTTAGATGAGTCCACTGGGAATGTTTCCTCAGTGTTTGATTATGGAGCTGGCCATGTTCATCCTGAGAAGGCCATGGACCCTGGGTTGGTTTATGATATTTCTAGTTTTGATTATGTGGATTTCTTGTGTAATTCAAATTATACCACTAAGAATATTCAAGTGATCACAAGGAAGGGTGCAGATTGCAGTGGGGCAAAGAAGGCAGGACATTCTGGGAACTTGAATTACCCATCATTGTCTGCAGTGTTTCAACAATATGATTTTATTAGAACTGTGACCAATGTTGGGGACCCCAATTCAGTCTACAAAGTCACTATTAAACCACCTGCTGGAATGGTGGTCACTGTCCATCCAGAGACCCTATCTTTCAGGAGGGTGGGTCAAAAGTTGAACTTTCTTGTTAGGGTGCAAACTAGGGCAGTTAAACTTTCCCCAGGAAGTTCTAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGCAAGCACATTGTCACAAGTCCCTTAGTTGTGACAATGCAGCAACCTCTGGATTAG 2292 0.5127 MAPFPSLIFLFFTATLSLLPSSFSSSSSDPESKTFIIQVHHDAKPSIFPTHKHWYESSLSSISSTNPIIHTYDTVFHGFSAKLSPLEAQKLQSLSHVITLIPEQVRHLHTTRSPQFLGLKTADRAGLLHETDFGSDLVIGVIDTGIWPERQSFNDRDLGPVPAKWKGQCVAGKGFPASSCNRKLIGARYFSAGMNETTEYRSPRDSDGHGTHTASIAAGRYVSSASTLGYAKGVAAGMAPKARLAVYKVCWTGGCYDSDILAAFDAAVSDGVDVASLSVGGVVVPYHLDVIAIGAFGASSAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVKLGNGKIIPGVSIYGGPGLTPGRMYPVVYAGGGDGYSSSLCLEGSLDPKFVKGKIVVCDRGINSRAAKGEVVKKAGGIGMILANGVFDGEGLVADCHVLPATAVGASGGDEIRSYIAAGAKSRSPPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPVWSPAAIRSALMTTAYTVDNRGHTMLDESTGNVSSVFDYGAGHVHPEKAMDPGLVYDISSFDYVDFLCNSNYTTKNIQVITRKGADCSGAKKAGHSGNLNYPSLSAVFQQYDFIRTVTNVGDPNSVYKVTIKPPAGMVVTVHPETLSFRRVGQKLNFLVRVQTRAVKLSPGSSSVKSGSIVWSDGKHIVTSPLVVTMQQPLD. 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11594 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Seca4g11594 763 Pfam PA domain 367 453 IPR003137 -
Seca4g11594 763 SUPERFAMILY Protease propeptides/inhibitors 33 107 - -
Seca4g11594 763 Gene3D - 628 759 - -
Seca4g11594 763 Pfam Fibronectin type-III domain 659 756 IPR041469 -
Seca4g11594 763 Gene3D Peptidase S8/S53 domain 136 624 IPR036852 GO:0004252|GO:0006508
Seca4g11594 763 Gene3D - 335 480 - -
Seca4g11594 763 Pfam Subtilase family 134 592 IPR000209 GO:0006508|GO:0008236
Seca4g11594 763 FunFam Subtilisin-like protease SBT1.5 136 345 - -
Seca4g11594 763 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Seca4g11594 763 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Seca4g11594 763 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Seca4g11594 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 109 IPR037045 -
Seca4g11594 763 SUPERFAMILY PA domain 367 454 IPR046450 -
Seca4g11594 763 SUPERFAMILY Subtilisin-like 108 615 IPR036852 GO:0004252|GO:0006508
Seca4g11594 763 CDD PA_subtilisin_like 341 472 - -
Seca4g11594 763 FunFam p69E protein-like 628 759 - -
Seca4g11594 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 756 IPR045051 -
Seca4g11594 763 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Seca4g11594 763 FunFam subtilisin-like protease SBT1.5 335 479 - -
Seca4g11594 763 FunFam Subtilisin-like protease SBT1.9 23 109 - -
Seca4g11594 763 ProSiteProfiles Serine proteases, subtilase domain profile. 116 611 - -
Seca4g11594 763 CDD Peptidases_S8_3 107 577 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11594 Seca-Chr4 255621868 255624225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11594 34 762 Subtilisin-like Serine Gene Family AT3G14240 77.837 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11594 - - gmx:100808511 1281.54