LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g11585	ATGAAAGAAATTGTGGTCGTGGTCGGCGAAGCGGTGGAGGAGCAGAAGGGGAAGCGGCGGAGGCAGGGGACTTATGTTTCATCCACACCCACTGATATGAAGGCAATACCATCTAGTAGAATGAATTGTACAACTGACATCACTGTGACTCTGCATAAAGATGGGTTTTGGTACATCCAGAAATGTGTGCATGAACATAGGCATGACCTGAGTCCTGGAAGGTCGAGATTATTTGCAAAGAACCAAAAGATGAGCTTGCATGTGAAACGACTTGTTGAATTAAATGATGAAGCAGGTGTCAGGATAAACAAGAGCTTTCGATCTCTAGTTTATGAAGAAGGGGGATATGAAAATGTCCCATTTGTTGAAAGAGACATACAGAAATACATGGGGCAGACAAGACGGACCCTCGGCAAGGACGACCAGTGCAAGGCAATGCAAAAGGCCATTGAGATTGTAATTCCCACTACTCGACACAGGTGGTATTTGTGGCACATCATGAAGAAAATTCCAGAAAAGTTGAAGAGTTGTCTTCAATACAAGTCAATGAAGAATGAGTTGAAGTGTGTAGCGTACGACTCACTAAGTGAGGGTGAAAAGGAATATGAGGCAGATTTCTGGTCCTTTAACACCATACTCCCTTGTGGGTCGAATTCTCCAATGGAGAGACAATTCCATGATGAGTACACACATTCTAAGTTTAAAGAGGTTCAGATTGAATTTAAAGCAAAGATGAATTGCACTGCTGCTTGTGAAAGTGTGGATGGATCCCTATGTTTTTATAAAGTGATAGAAGACTTGTATGTTGGTGGAAATCCTAGAGAGGCGAAGAAGCACACTTACATTAAGTGTAGTTATGATGCCAAACAATATGGCCAAAAAATGTGTCGTTTCGATGAGTTGTGTAAAGACTTCTATACGGTGGCTGAGATAGCAGCTGAAACTCTAGAGGGCACAAGTCTATTAGCACAAACTATTCTTGGTGTGAAAGATAAAGTGAAGGCAATTGGTGCATGCACACAAAATTTGTACTCAAATAAGGAAGTCCACCGTACTGAACAAGTTGAAGAAAGAATTTGTTAG	1083	0.4155	MKEIVVVVGEAVEEQKGKRRRQGTYVSSTPTDMKAIPSSRMNCTTDITVTLHKDGFWYIQKCVHEHRHDLSPGRSRLFAKNQKMSLHVKRLVELNDEAGVRINKSFRSLVYEEGGYENVPFVERDIQKYMGQTRRTLGKDDQCKAMQKAIEIVIPTTRHRWYLWHIMKKIPEKLKSCLQYKSMKNELKCVAYDSLSEGEKEYEADFWSFNTILPCGSNSPMERQFHDEYTHSKFKEVQIEFKAKMNCTAACESVDGSLCFYKVIEDLYVGGNPREAKKHTYIKCSYDAKQYGQKMCRFDELCKDFYTVAEIAAETLEGTSLLAQTILGVKDKVKAIGACTQNLYSNKEVHRTEQVEERIC.	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g11585	360	PANTHER	OS01G0519700 PROTEIN	140	201	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g11585	Seca-Chr4	255550394	255554151	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca4g11585		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g11585	-		-	vra:106763416	180.259