Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11525 ATGGCTAACCACATTTGTCTCTCTCTGTGGTTCTCTTATATCACATTTGTTTCCACATTGGCTCAGTCTGATAATTATATCATCCACATGGACTTATCAGCCATGCCCAAAGCATTCTCCACCCAACATAGTTGGTATCTATCCACTCTTTCCTCTGCACTACTGTACAATACTCAAGCTACTACTACCAACACTCTTAACTCTTTTTCTTCTAAGCTTATTTATACATACACCAATGTCATGAATGGTTTCAGTGCAAGTTTGTCACCTACAGAGCTTGAAGCTCTTAAAACCTCTCCTGGTTACATTTCATCCATTCCTGATTTACCTGTCAAGCTTGACACAACCTACTCACCTCATTTCCTTGGCCTCAATCCCCACATAGGAGCATGGCCTGCTTCTGAGTTTGGCAAAGATATCATTGTTGGTTTGGTGGACACTGGAGTTTGGCCAGAGAGTGAAAGCTTCAGAGATTATGGGATGACTAAAATTCCTTCAAGATGGAAAGGCCATTGTGAAAATAGCATCCAATTCAACTCATCACTTTGCAACAAGAAACTCATTGGAGCTAGGTTCTTTAACAAAGGGTTGCTTGCCAAAAACCCCAACATCACCACAATTGTGAACTCTACCCGTGACACTGAAGGTCACGGGACTCACACTTCAACCACCGCTGCTGGGAGCCGAGTTGAGGGTGCATCATACTTTGGTTATGCCTCTGGAACAGCCACAGGAATAGCTTCACAGGCAAGGGTAGCTATGTACAAGGCACTTTGGGAAGAAGGAGCCTACACATCTGATGTGATAGCTGCAATTGATAGTGCAATATCAGATGGTGTAGATGTTCTTTCATTATCATTTGGTTTTGATGATGTCCCCTTGTACAAAGACCCTGTTGCTATAGCCACATTTGCAGCCATGGAGAAGGGTATTTTTGTGTCCACTTCAGCAGGGAATGAAGGGCCTTGGCTTAAAACTCTGCATAATGGAACACCATGGGTTATAACAGTGGCGGCTGGCACTTTAGATAGAGAATTTCATGGGACTCTTATGCTTGGCAATGGAATCCCAATCACAGGCTTGTCTCTCTATCCAGGAAAATTCTCTTCCCACCAATTTCCAATTGTTTTCATGGGTTTGTGTGACAGTGTGAAGGAACTGGTCAAAGTGAAGAGCAAGATTGTGGTGTGTGAAGACAAGAATTCAACAATTTCTGATCAAGTGTCTAATGTAGACACAGCAAAAGTTATAGGGGCTGTGTTCATAACTAACAGCACTGACAGTTCATTCTTCTTAGAGAATAGTTTTGCATCCATCATTGTTAGCCCAATGAATGGAGAAATTGTCAAAGCATACATCAAGAATAACTCTGATTCAAAAGCAAGCATGACATTTAAGATAACAGCTTTTGGCACTAGACCAGCACCAAGTGTGGATAGTTACAGTTCTAGAGGACCATCAAATAGTTGTCCATTTGTGTTGAAACCAGACATCACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAAGGTTCCAGTGGATGAGTTAGGTTCCCATAAACACTATAGCAACTTCAATTTGCTAAGTGGCACATCCATGGCATGTCCTCATGTTGCAGGGGTGGCAGCACTTTTAAAAGGTGCACACTCTGATTGGAGCCCTGCAGCTATTCGGTCAGCTATCATGACAACCTCGGACATGTTTGACAATACTATGGGACCCATCAAAGACATAGGTGAAGGTTACAAAACAGCTTCTCCTCTAGCATTGGGAGCTGGTTACATAAACCCCAACAGAGCCCTTGACCCTGGACTTGTTTATGATGTGGGAGTAAAAGATTATGTGACTCTTCTCTGTGCATTGAACTTCACACAGAAGAACATCACAGCCATAACTAGGTCCTCTTCCAATGATTGCTCTAAACCTTCCTTGGATCTTAACTACCCTTCATTCATTGCTTTCTTCAATGCCAACAATTCTTCTTCAGGGGCAATAAAAGAATTTCAGAGAACAGTGACCAATGTTGGGGAGGGACCAACAATTTATGCTGCTAGCATTACTCCCATCAAAGGGTTCCGTGTCAATGTCATCCCCAACAAGTTGGTGTTCAGAGAGAAGAACGAGAAGCTAAGTTACAAGTTGAGGATTGAGGGTCCAATAACAAAGACCAAAGTAAAGAAAGTAGCTTTTGGGTACCTCAATTGGATGGACGTGAAGCATGTGGTGAGGAGCCCTATTGTGGTCACCACCCTCAAATTCGATTTCTAG 2274 0.4283 MANHICLSLWFSYITFVSTLAQSDNYIIHMDLSAMPKAFSTQHSWYLSTLSSALLYNTQATTTNTLNSFSSKLIYTYTNVMNGFSASLSPTELEALKTSPGYISSIPDLPVKLDTTYSPHFLGLNPHIGAWPASEFGKDIIVGLVDTGVWPESESFRDYGMTKIPSRWKGHCENSIQFNSSLCNKKLIGARFFNKGLLAKNPNITTIVNSTRDTEGHGTHTSTTAAGSRVEGASYFGYASGTATGIASQARVAMYKALWEEGAYTSDVIAAIDSAISDGVDVLSLSFGFDDVPLYKDPVAIATFAAMEKGIFVSTSAGNEGPWLKTLHNGTPWVITVAAGTLDREFHGTLMLGNGIPITGLSLYPGKFSSHQFPIVFMGLCDSVKELVKVKSKIVVCEDKNSTISDQVSNVDTAKVIGAVFITNSTDSSFFLENSFASIIVSPMNGEIVKAYIKNNSDSKASMTFKITAFGTRPAPSVDSYSSRGPSNSCPFVLKPDITAPGTSILAAWPQKVPVDELGSHKHYSNFNLLSGTSMACPHVAGVAALLKGAHSDWSPAAIRSAIMTTSDMFDNTMGPIKDIGEGYKTASPLALGAGYINPNRALDPGLVYDVGVKDYVTLLCALNFTQKNITAITRSSSNDCSKPSLDLNYPSFIAFFNANNSSSGAIKEFQRTVTNVGEGPTIYAASITPIKGFRVNVIPNKLVFREKNEKLSYKLRIEGPITKTKVKKVAFGYLNWMDVKHVVRSPIVVTTLKFDF. 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11525 757 Gene3D - 343 471 - -
Seca4g11525 757 FunFam Subtilisin-like protease SBT1.9 14 114 - -
Seca4g11525 757 Gene3D - 620 753 - -
Seca4g11525 757 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Seca4g11525 757 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Seca4g11525 757 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Seca4g11525 757 CDD PA_subtilisin_like 352 462 - -
Seca4g11525 757 SUPERFAMILY Subtilisin-like 113 607 IPR036852 GO:0004252|GO:0006508
Seca4g11525 757 Pfam Peptidase inhibitor I9 26 113 IPR010259 -
Seca4g11525 757 Pfam Fibronectin type-III domain 647 750 IPR041469 -
Seca4g11525 757 Gene3D Peptidase S8/S53 domain 139 616 IPR036852 GO:0004252|GO:0006508
Seca4g11525 757 FunFam Subtilisin-like protease SBT1.5 139 352 - -
Seca4g11525 757 CDD Peptidases_S8_3 111 568 IPR034197 -
Seca4g11525 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 750 IPR045051 -
Seca4g11525 757 ProSiteProfiles Serine proteases, subtilase domain profile. 116 603 - -
Seca4g11525 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 114 IPR037045 -
Seca4g11525 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Seca4g11525 757 Pfam Subtilase family 137 568 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11525 Seca-Chr4 254763506 254765779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11525 1 739 Subtilisin-like Serine Gene Family AT5G67090 46.296 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11525 - - gmx:100783026 1152.12