Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11520 ATGACAGCTGTCACTGCCATAGACACGAGTGGGATCGACACTTTTTGTGAACTTAGAAGGATGCTGGACAAAAGATCACTTCAGTACATGTTGGAAAATCCTGTTGGAAATATGATGGAAAAGTTGCATCTATCAAATATTTTGGAGTTCTTTGGGTTAAAAGGAGTTTATCTAATAGTGGTAGAAGTTGTGGCTAACATTCAAACCTCCTGGAAAGCTCAACCTTGA 228 0.3904 MTAVTAIDTSGIDTFCELRRMLDKRSLQYMLENPVGNMMEKLHLSNILEFFGLKGVYLIVVEVVANIQTSWKAQP. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11520 75 Gene3D STAS domain 1 73 IPR036513 -
Seca4g11520 75 ProSiteProfiles STAS domain profile. 1 67 IPR002645 -
Seca4g11520 75 Pfam STAS domain 1 52 IPR002645 -
Seca4g11520 75 SUPERFAMILY SpoIIaa-like 1 53 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11520 Seca-Chr4 254707086 254707496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11520 1 75 Inorganic Solute Cotransporters AT3G15990 59.740 1.84e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11520 K17471 - gmx:100780331 117.857