Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11501 ATGTTGGAAAGTAGTGGAGAAGATAACAACTTGAAAGAAGTTCCGGTTAGAAATATTCATCAGAGAAAGAAAGTGGATATACGAAAAGGGTGTGTACCAATCAAGGTAGGGGAAGGTGAAGAGAAACAGAAGATAGTGGTGCCTGTGATGTACATCAACCACCCACTGTTTTCTCAGTTACTAAAGGAGGCAGAGGAAGAGTATGGTTTTGATCAGCAGGGAACTATAATCATCCCTTGTCGCGTGGAGGAATTTAGGCATATTCAGAGCCTCATTGATAGGGAGATGTGCCCCCAACACCACCACCATCATGTCATTAACTGTTTCAAGCCTTCATGTCAATAA 345 0.4232 MLESSGEDNNLKEVPVRNIHQRKKVDIRKGCVPIKVGEGEEKQKIVVPVMYINHPLFSQLLKEAEEEYGFDQQGTIIIPCRVEEFRHIQSLIDREMCPQHHHHHVINCFKPSCQ. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11501 114 Pfam Auxin responsive protein 21 91 IPR003676 GO:0009733
Seca4g11501 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11501 Seca-Chr4 254395959 254396303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11501 26 88 Calmodulin-binding Proteins AT5G20810 44.444 4.71e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11501 K14488 - gmx:100808516 153.68