Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11495 ATGGGTTCAAAGTCCAAAATTTTCACCTTTGATGAGGTGGCTAAGCACAATCACAAGAAGGATTGCTGGATCATAGTCAATGGAAAGGTATATGATGTCACCCCATTCTTGGAAGATCATCCGGGAGGTGATGAAGCTTTACTGTCTGCTGCAGAGAAGGATGCCACCACTGATTTTGAAGATGTTGGCCACAGTGACTCAGCGGTAGAAATGATGGAAAAATACTTTGTTGGGGAGGTTGACAGCACTACTCTTCCAGCAAAAGTTAGCAGCAATCCTCCACGACCAACACAAGCATCTGCTTATAGCAATGAATCTTCTGGATTTGTTGTAAAGATGTTGCAGTACTTGGTGCCATTGTTGATATTGGGCTTTGCATTTGCCCTGCAGTACTTTGGCAAGAAAAGCAAGTCCGACGAATCATGA 426 0.4366 MGSKSKIFTFDEVAKHNHKKDCWIIVNGKVYDVTPFLEDHPGGDEALLSAAEKDATTDFEDVGHSDSAVEMMEKYFVGEVDSTTLPAKVSSNPPRPTQASAYSNESSGFVVKMLQYLVPLLILGFAFALQYFGKKSKSDES. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11495 141 Gene3D - 1 85 IPR036400 -
Seca4g11495 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Seca4g11495 141 FunFam Cytochrome b5 type B 2 85 - -
Seca4g11495 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Seca4g11495 141 PANTHER CYTOCHROME B5 3 134 - -
Seca4g11495 141 SMART Cyt_b5_2 8 81 IPR001199 -
Seca4g11495 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 88 IPR036400 -
Seca4g11495 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Seca4g11495 141 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Seca4g11495 141 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Seca4g11495 141 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Seca4g11495 141 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11495 Seca-Chr4 254271976 254276409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11495 1 134 NADPH P450 reductases AT5G48810 55.970 1.20e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11495 K23490 - gmx:100305546 231.491