Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11432 ATGGAGGCCCTCAATGCTGCTGGCTTGACCCCTCTATCTGTGCTTTCTGATAGAAGAAAACAACCCACAAAGTTCTCATCACTTCCCACAATATCTGCATGCAAAGTTTCAAGCTTTTGTAATTCTAGCAACAAGAAACAGGCGCTGCAAGAGTGCTTAACAAAAGGTTTGCATGGGGGTCTATTTCTTGCAGCTTCAGTTGTGAATGGTGGAATTGCCACAGCTCTGACATATGAGGAAGCACTGAGCCAATCTGTGACTGCCCCTAGTTCTGGGGATTTTGATGCAAATGGGTTTGTAGATAGTGTTATCAGCTTTGCAACAGAGAACCCTGCAATTCTTGCTGGAGGAGTGGCTATTTTGGCAGTGCCAGTGGTTTTGTCTCAGGTTCTGAAGAAGCCTAAGCCATGGGGCGTTGAGTCAGCCAAAAATGCATATGTAAAACTGGGCGCTGATGGGAATGCTCAATTGCTTGATATAAGAGCACCTGTGGAGGTTAGGCAAGTGGGTAGCCCAGATGTTGGGGGTCTGAGGAAGAAAACTGTATCAATAGCTTATAAGGGTGAAGATAAGCCAGGGTTTCTAAAGAAGCTTTCATTGAAGTTCAAGGAACCAGAGAATACCACATTGTTCATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTCACCCTTAACGGATTTAAAGCTGCTTATGCAATTAAAGATGGTGCAGAAGGACCACGAGGATGGACGAATAGTGGGCTTCCTTGGATAGAACCACGAAAAGCAGCTAGTTTGGATTTTGGCAATCTGACAGATGCTCTCAGTGACACCTCTGATGGCCTGGCTGTTGCACTTGGGATTGCTGCAGCTACTGGGCTGGGTTTCTTAGCTTTTACTGAGATAGAAACAATTCTCCAACTTTTAGGATCAGCTGCACTTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAGGATCGGAAGAATACACTAAAACAAGTTGATGAGTTCTTGAACACCAAGGTTGCCCCTAAAGAGCTTGTTGATGAAATAACGCAAATTGGAAAGGCTCTTCTACCAACCTCCACCAATAATAAGGCTCTTCCCGCACCAGCAGAAAGTAGTCCAGAGCTTGCTACAGCTGATAGCACTGTGCAAAAAGCAGCAGCTACTCTTGAGCCTGAAACTGTCTCCGAGTCCAAAATAGATGCAGCACCGGAAGTAAACTCAGTCCCCAAAACTGAAATTAAGGCAGAATCAGTTCCTGTGCAACCAAGACCACTTTCACCATACCCATACTTACCATCCTTCATGCCCATTTTTTTTCTTGATTTACAGTATCCAGATTTCAAGCCTCCAACATCTCCTTCTCCTCCTGACACTGACTCTGAGTCCAAAATAGATGCAGCACCGGAACCTGCTCCGGAAGTAAACTCAGTCCCCAAAACTGAAATTAAGGCAGAATCAGTTCCTGAGCAACCAAGACCACTTTCACCATACCCATATTATCCAGATTTCAAGCCTCCAACATCTCCTTCTCCTTCACAGCCCTAG 1551 0.4507 MEALNAAGLTPLSVLSDRRKQPTKFSSLPTISACKVSSFCNSSNKKQALQECLTKGLHGGLFLAASVVNGGIATALTYEEALSQSVTAPSSGDFDANGFVDSVISFATENPAILAGGVAILAVPVVLSQVLKKPKPWGVESAKNAYVKLGADGNAQLLDIRAPVEVRQVGSPDVGGLRKKTVSIAYKGEDKPGFLKKLSLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKAAYAIKDGAEGPRGWTNSGLPWIEPRKAASLDFGNLTDALSDTSDGLAVALGIAAATGLGFLAFTEIETILQLLGSAALVQFASKKLLFAEDRKNTLKQVDEFLNTKVAPKELVDEITQIGKALLPTSTNNKALPAPAESSPELATADSTVQKAAATLEPETVSESKIDAAPEVNSVPKTEIKAESVPVQPRPLSPYPYLPSFMPIFFLDLQYPDFKPPTSPSPPDTDSESKIDAAPEPAPEVNSVPKTEIKAESVPEQPRPLSPYPYYPDFKPPTSPSPSQP. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11432 516 MobiDBLite consensus disorder prediction 493 516 - -
Seca4g11432 516 Gene3D - 137 267 IPR036873 -
Seca4g11432 516 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 135 266 - -
Seca4g11432 516 MobiDBLite consensus disorder prediction 448 516 - -
Seca4g11432 516 MobiDBLite consensus disorder prediction 361 384 - -
Seca4g11432 516 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 139 257 IPR036873 -
Seca4g11432 516 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 457 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11432 Seca-Chr4 253369387 253375105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11432 1 371 Sulfurtransferasese or Rhodanese AT4G01050 67.460 7.05e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11432 K17525 - gmx:100810796 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11432 4 253369387 253375105 Seca4g11432 4 253369387 253375105 ECH