Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11358 ATGGTCTTTTGCTTGTGGTTTTATTCTGTATATTGTAGGCACAAATTCACTTTTAGCCCTTATGATTGTACCTGTCTGTCAAACTTTTATGCCTTGCCCTTGAACGTAAATTGTAATTGCACCTATTTTGATAGGAGTTACAAAGAATTAATGGCCAAGTGCAATCTTTTGGGAAGAGGTGAGGCTCGTTATAGTAAAAAGCTTGAGAAGGCTAAAGAGAAGATTGTTAAATTGAAGGCAAGGGTACAAGAACTAGAGACAATGGTTGAAGTAAAAGAGAATGAATATTTGATGTCTCTGAAAGTTCCAAAGAAAGCCAAGTCTTCAAAGAATCTTGAAAATAGCATCAATTCTATTTCTAATTCTGATGCATTGGCAGCTAGCAATTTTTCTTTAAAAGAGCAAGGCAAACAAAGTTCGACACCCAAACCTGGAATTGATCTGACTGCGAATGATGACAGTAAATATTTACAATCTTTGAAGATAGAAAACTTAAATGCTACTAAAAATGAGGCTGTGAATATTAGTAATGGAAGTAAAACTACCTTGTCTCTTGATAAAGAGAGAGATTGTATCTTTATTGATGATGATGCTACCGATTATACTAAAGCATTACCTGAATGTCCAAAACACAACTACAAAGATCAAAAGAGGGATGGTGATACTTTTAGCAAGCCATCTCTTGTGAAGCCAGAAGCAGCATCTCGCATAAAGACTGGACCATCATTTCAAGGAAAATGTAATTTGGATGAGCCTTCAAGAGTTGATATTGACATTAAAATGGATGACATTTCTGCTTGTGCTATGAATGAAGATGCGACGTTACAAGCCAACGTTAAACAAGCTCAACCTGTGGTTAACATTAGAAAGGAGTCACCATTAACACTTTCAAATTCAGTGGACATCTGCTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTCATCGATACTTGGGTAAATGGTGCAAGCGTGGGCAAAATAGTGAATCAACATCTACTAAAGGATCAAATAATGGGGATTTGATAGCTGTTGGGGCTGATGGTAGAGGTGGCAGAATAAAAGTTCTAAGGAATTCAAGTCAAAGCTTCTTGGATGGTAAAGAAAATTCTGTAAGTTCAAAAAGGTTGAAGTCTGGACCTAAAACAAGTAGTTTGCAGTCACGGGGGTGCCTGCAGATAGAACACTTCTTTGGGAAGGTCAATCAGTAA 1209 0.3722 MVFCLWFYSVYCRHKFTFSPYDCTCLSNFYALPLNVNCNCTYFDRSYKELMAKCNLLGRGEARYSKKLEKAKEKIVKLKARVQELETMVEVKENEYLMSLKVPKKAKSSKNLENSINSISNSDALAASNFSLKEQGKQSSTPKPGIDLTANDDSKYLQSLKIENLNATKNEAVNISNGSKTTLSLDKERDCIFIDDDATDYTKALPECPKHNYKDQKRDGDTFSKPSLVKPEAASRIKTGPSFQGKCNLDEPSRVDIDIKMDDISACAMNEDATLQANVKQAQPVVNIRKESPLTLSNSVDICFSGGLLGPDGTHRYLGKWCKRGQNSESTSTKGSNNGDLIAVGADGRGGRIKVLRNSSQSFLDGKENSVSSKRLKSGPKTSSLQSRGCLQIEHFFGKVNQ. 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11358 402 MobiDBLite consensus disorder prediction 364 385 - -
Seca4g11358 402 Coils Coil 61 95 - -
Seca4g11358 402 PANTHER RING ZINC FINGER PROTEIN-RELATED 44 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11358 Seca-Chr4 252272880 252275531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11358 287 402 C3H Transcription Factor Family AT4G01270 45.378 1.54e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11358 K11985 - gmx:100812811 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11358 4 252272880 252275531 Seca4g11358 4 252272880 252275531 ECH