Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11341 ATGAAAGTTGAAGTAGAAATTGTTTCTAGAGAAGACATTAGGCCTTCCTCTCCAACACCCAATCACCTCAGAGACTTCAAACTTTCCCTTTTGGATCAGCTTATTCCATCTCCATATGCTCCAATAATCCTATTCTATACCCCACCTGATCACAGTGACACAACTAGCCTTTCTGAAGCCCCCAAAAGGTTAGAATTGTTGAAGAAATCTTTATCTGAGACACTAACCTTGTTCTACCCACTTGGTGGCAGGATCAAAGATGACATGTCCATTGAGTGCAATGATGAAGGGGCTAATTTTGTGGTAACCCAAGTGAAGTGTCCTCTTTTAAAATTTCTTGACCAGCCTCAGCTAAACTTACTGCACGAGTTCCTTCCTGGTGTACTCATTTCTGAAGATTCAAATTCAGGAACCTATGTAACTAACATTCAAGTAAACTTTTTTGAATGTGGGGGAATTGCTATTGGCTTATGCATTTCTCACAAGATCCTAGATGGGGCTGCACTAAGCACCTTCCTGAAAGGGTGGACAGGGAGGGCTAGGGGTTGCAACCAATTACCCCAACCCAATTTCATAGCATCTTCTCTCTTTCCCACAAACAATTCATCACTCACACTCAAAGACTTATCAATGGCTATGTGGGGTTCCTTGTTCAAGCAAGGCAAGTGGGTCACAAAGAGATTTCTGTTCAGAAACTCAGATATAATCACTCTCAAGGCTCAAATATCAGATACAGCAAACTCTTCCTGTGTAGTGCAAGACCCTACACGTTTAGAGATTGTTTCTGCATTGTTGTGGAAGTCTCTCATGGCTGTGTCCAAGGTAAGGTTTGGTACCCAGAGGCCTTCTCTGCTGACTCATTTGGTGAACCTGCGCAGGAGAATAGATGAGGCTCTTTGTCCACAGCATACCATGGGGAACCTTTTTGGGTTTGTGGCTGTGGAGCACTTGAGTGATCATGTGAAGGGGTTGGAAGAGTTGGTGGGTAAGTTGAGGAATGCAATATCCAAAGTTGATAGTGAATTTGTTGAAGAATTGCAAGGCAACAAGGGAATGTCAATTCTGCAAGAGTCTCTTAGAGCAATAGGTGAGACAGGATCAAAGAGTGAAGTGGACTACTTTGGGTTTAGCAGCTGGTGCAATTTTGAGTTCTATGATGCTGATTTTGGGTGGGGAAAGCCCACATGGGTGACTAGTGTTCCTTCAACTGGTTCAGTGTTTATGAATCTTATTATCCTGGTTGATACCAGGCTAAGAGATGGCATAGAAGCTTGGGTTACCTTAGATGAACAGGACATGACTCATTTGATAGCAGACACTGAACTGCTAACTTATGCAACCTTGGATCCAAGTCCACTTGCAATGAGTTCATTTTCCTAA 1380 0.429 MKVEVEIVSREDIRPSSPTPNHLRDFKLSLLDQLIPSPYAPIILFYTPPDHSDTTSLSEAPKRLELLKKSLSETLTLFYPLGGRIKDDMSIECNDEGANFVVTQVKCPLLKFLDQPQLNLLHEFLPGVLISEDSNSGTYVTNIQVNFFECGGIAIGLCISHKILDGAALSTFLKGWTGRARGCNQLPQPNFIASSLFPTNNSSLTLKDLSMAMWGSLFKQGKWVTKRFLFRNSDIITLKAQISDTANSSCVVQDPTRLEIVSALLWKSLMAVSKVRFGTQRPSLLTHLVNLRRRIDEALCPQHTMGNLFGFVAVEHLSDHVKGLEELVGKLRNAISKVDSEFVEELQGNKGMSILQESLRAIGETGSKSEVDYFGFSSWCNFEFYDADFGWGKPTWVTSVPSTGSVFMNLIILVDTRLRDGIEAWVTLDEQDMTHLIADTELLTYATLDPSPLAMSSFS. 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11341 459 Gene3D - 1 206 IPR023213 -
Seca4g11341 459 Gene3D - 221 445 IPR023213 -
Seca4g11341 459 PANTHER F21J9.9 6 446 - -
Seca4g11341 459 Pfam Transferase family 4 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11341 Seca-Chr4 252007348 252008727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11341 3 408 Monolignol Biosynthesis Gene Families AT5G48930 25.527 1.70e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11341 - - gmx:100305374 656.751