Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11325 ATGATTGGCTTTATGGGAGCTATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGAAAGGGATGAAGGGGATTTCAGTTAGTGGAATGAACTACTATGCTTGTATTTCCATATTGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCCAAGGTGTGGGCTGCAGGATGGCAAACAACTGTGTCTCAGATTGGCCCCAATTTTGTATGGTGGGTGGGTGCCCAGAGTGTCTTCTTCCACTTGTATGATCAAGTCTCTTACATGTCCCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCTGTAATTGTTTCTTTCATCCTTATCTTTCACACGCCAGTTCAACCCATCAATGTTGGGCATATTAGTAGTATGACTTAG 423 0.409 MIGFMGAMISNLAFVFRNIFSKKGMKGISVSGMNYYACISILSLLILTPFAIAVEGPKVWAAGWQTTVSQIGPNFVWWVGAQSVFFHLYDQVSYMSLDQISPLTFSIGNTMKRISVIVSFILIFHTPVQPINVGHISSMT. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11325 140 PANTHER SOLUTE CARRIER FAMILY 35 2 133 - -
Seca4g11325 140 Pfam Triose-phosphate Transporter family 1 133 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11325 Seca-Chr4 251809915 251811605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11325 3 132 Antiporters AT1G61800 85.385 2.59e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11325 K15283 - gmx:100804205 254.988