Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11316 ATGGAAACTTGCACGGCTCTGCTTTTTTTAACGGCGATCACGGCATACCTGCTATGGTTCACTTTCATCTCACGGTCATTGAGAGGTCCACGTGTCTGGCCTCTATTGGGCAGTCTCCCGGGCCTAATAGAGAACTGTGATCGCATGCATGACTGGATCTGTGACAACCTCCGCGCGTGTGCCGGCACGTACCAGACCTGCATCTGTGCAATCCCCTTCCTAGCCAAGAGGCAAGGTCTCGTGACTGTCACGTGCGACCCGAGGAACCTCGAGCACATACTCAAGACCCGCTTCGACAATTACCCCAAAGGTCCCACGTGGCATGCTGTGTTCCACGATCTGTTAGGAGATGGGATCTTCAACTCTGATGGTGACACGTGGCTGTTCCAGCGTAAGACCGCCGCACTGGAATTCACCACCAGAACCCTACGCCAAGCCATGGCTCGGTGGGTGACCCGAGCCATCAAGGACCGGCTCTGCTTGATCCTCAAGAACGCCGAGCTGCAAGCCGAACCGGTGGATCTACAAGACCTGATGCTCCGGCTCACGTTTGATAACATTTGCGGTTTGGCTTTCGGGAGGGACCCACAGACCTGTGCTCCGGGGCTGCCTGAAAACCGGTTCGCAACGGCTTTCGACCGAGCCACCGAAGCCACGCTCCAGCGGTTCATATTGCCGGAGGTGTTGTGGAAAGTGAAGAAATGGCTTCGGCTCGGAATGGAAGTTAGCTTGAACCGAAGCCTTGTCTACGTGGACGAACATTTGTCTAGTGTGATTGAGCAAAAAGATGGGACCCTTCATGATGACTTGCTCACAAGGTTTATGAAGAAAAAGGAGTGCTACTCAGACAAGTTCCTCCAACACGTGGCACTGAACTTCATCCTAGCTGGACGTGACACGTCATCGGTGGCGCTTAGCTGGTTTTTTTGGCTGGTGATTCAGAATCCCAGGGTGGAAGAGAAAATTTTACGGGAGATCTGCACGGTCCTGATGGAGACACGTGGCGATGATGTGGCGAAGTGGGTGGATGAGCCGTTGGTGTTTGAGGAAGTTGATCGTTTGGTTTATCTCAAGGCTGCGTTGTCGGAGACGCTGAGGCTGTACCCTTCGGTGCCGGAGGATTCAAAGCATGTGGTGGCGGATGATGTGTTGCCGGACGGCACGTTTGTTCCGGCGGGATCGTCGGTGACGTATTCGATATATTCGGCGGGGAGGTTGAAGTCCACGTGGGGTGAGGATTGCATGGAGTTTCGACCTGAGAGGTGGTTGTCATTGGATGGGACAAAGTTCACCATGAAGGACTCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCAAGGATATGTTTGGGGAAGGATTTAGCATATTTGCAGATGAAATCCATCGCCGCCGCGGTGCTGCTCCGTCACCGGCTTGTGATGGTGCCTGGCCACCAGGTGGAGCAGAAGATGTCACTCACCTTGTTCATGAAAAATGGGCTCAGGGTCAATGTGCACAACAGGGATTTGAAGGGGGTTTTGGCAAGTTTACATAAAGAAAGGGAGGTAGAGATCCAGGGGAAAGAGTCCGCAGATTTGAGATGCAAGGGAAGTTAG 1593 0.5317 METCTALLFLTAITAYLLWFTFISRSLRGPRVWPLLGSLPGLIENCDRMHDWICDNLRACAGTYQTCICAIPFLAKRQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVTRAIKDRLCLILKNAELQAEPVDLQDLMLRLTFDNICGLAFGRDPQTCAPGLPENRFATAFDRATEATLQRFILPEVLWKVKKWLRLGMEVSLNRSLVYVDEHLSSVIEQKDGTLHDDLLTRFMKKKECYSDKFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRVEEKILREICTVLMETRGDDVAKWVDEPLVFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCMEFRPERWLSLDGTKFTMKDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVMVPGHQVEQKMSLTLFMKNGLRVNVHNRDLKGVLASLHKEREVEIQGKESADLRCKGS. 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11316 530 Pfam Cytochrome P450 28 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 SUPERFAMILY Cytochrome P450 27 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Seca4g11316 530 CDD CYP86A 67 493 - -
Seca4g11316 530 FunFam Cytochrome P450 21 503 - -
Seca4g11316 530 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11316 530 PANTHER CYTOCHROME P450 19 494 - -
Seca4g11316 530 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11316 Seca-Chr4 251677435 251679054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11316 1 511 Cytochrome P450 AT2G45970 78.887 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11316 K15398 - gmx:100779986 971.074