Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11310 ATGTCATCTTTAGACGTTGATTGCAAGCCAAGAGTTGGTATGGAATTTGATAGTGTAGAGACAGCTTGGCAATTTTGGCTTAGATATGGGGCACAAATTGGCCTTGGAGTTCGATTACGATACACAAACAAAAGAAAGCAAGATGGTGCTATTACTTCATGTAGATTTGCTTGTTGTAAGGAGGGGGTGCGAACAACAAAGAGTGCTTTGGTTAGAAACCATAGAGCTGCGACTAGAACTAATTGCAAAGCAAGAATTTCACTTATATTAAAGAATGAAAAGTTTGTCCTACATGAGTTTGTAGAGGACCATAACCACCCTCTACAACTTCCAGAGACAGCACACATGCTTGCATCACACAGAAAAATAAGTGAAGTCCAAGCATATGAGATTGATCTAGCTGATGACTTTGGATTAAAGCAAAAGTCAACATTTCAGCTTATAAGCACACATGCAGGGCATAGATCTAATCTTGGATATACACGGTTGGATGTAAAGAATTACCTCAATGCAAGAAGACAAAGAAGCATGGTGTATGGTGAAGTTGGATGTCTTTTGCAATATTTTCAACGACAATTAAAGGAAAACCCATATTTCTTCAATGCATTCCGAATGGATATGGATGAACAAATCACAAATGTATTATGGGATGATGCAAATATGGTGTTGGATTATGGGTATTTCGGTGATGTTATGTCATTGGATACTACATATTGTACCAATCGTGCAAATAGACCACTTGCTCTGTATTCTGGTTTCAACCATTATAGGGGTTTAGTCATTTTTGGGGCAACATTATTTTATGACGAAACAATTGAATCATTTAAATGA 831 0.3718 MSSLDVDCKPRVGMEFDSVETAWQFWLRYGAQIGLGVRLRYTNKRKQDGAITSCRFACCKEGVRTTKSALVRNHRAATRTNCKARISLILKNEKFVLHEFVEDHNHPLQLPETAHMLASHRKISEVQAYEIDLADDFGLKQKSTFQLISTHAGHRSNLGYTRLDVKNYLNARRQRSMVYGEVGCLLQYFQRQLKENPYFFNAFRMDMDEQITNVLWDDANMVLDYGYFGDVMSLDTTYCTNRANRPLALYSGFNHYRGLVIFGATLFYDETIESFK. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11310 276 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 276 IPR031052 GO:0006355
Seca4g11310 276 Pfam FAR1 DNA-binding domain 24 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11310 Seca-Chr4 251627632 251628462 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g11310 FAR1 4.1e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11310 - - aprc:113870350 387.111