Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11308 ATGGAGTTTGATACAGAAGATCATGCATATAGATTTTACAATATGTATGCTGGCTTCATTGGTTTTAGTGTTAGAAAAGATTGGAGAAATAAAAGCAAATTAGATGAGGAGATTGTGATATCTCGAAAATTTGTTTGTTTTAAAGAGGGCTTCAAAAAGGTTAAAGGCCATGAAGGAAAAATGACCCGTAAAGATATTAGAACTGGATGTTTAGCACACATGGTCATTGGTCGACAATTGAGTGGAAAATATATTGTTACATCTTTTGTAAAATACCATAATCATGAGCTTGCAACCCCCAAGAGTAGGTATAAATTACCATCACAAAGAAGGGTTTCTATTGCTCAAGCAGCTGAAGTTGAAATGGCGAATCGTTCTGGTATACGGCAAAAGTTAATTTTTGAGTTTATGAGTCGCCAGGTTGAGGGGAGAGAGAATGTTGGTTGCACTGCTAAAGATATCATCAATCATTTGAATTCTAAGAGGATGAAAGAGATGGAAGAAGTTATTCCACCAAAATATATCCTGAAGAGGTGGACTAAGAATGCTCGAAGTGGATGTGTTCTAGACAACAAGGGACAAATTATCAAAGAAGATCCAAAATTGGCTGTCTCAAATCGCTTTAAGGATTTGTGTCGTACTGCAGTAGAAATATCAAGTAAGGCTGTTGAATGTGAAGATGCTTCAACATTTTTTGCAATAAAATTGGTGGAAATTGGCATTCAAGTTGATAACATCTTAATTAAAAGATCTTACACACCAATTACAGATCTTGATGATGCAAATTGCCAGACTAATGAAGATACAATAGATAAGACAACCACCAATTCAAAAGTCAAGGGTATAAAAAAGAAGAATGGTGCATCTCGGGTAAAAGGTAGACCAAAAAGTTGTGTGGAGAAAAAAAGAAGAAGCAAAGGGACTACATCGAGACAAGTTTTTTCTCCCACCATGCCACTTCCAGCTATATAG 972 0.3591 MEFDTEDHAYRFYNMYAGFIGFSVRKDWRNKSKLDEEIVISRKFVCFKEGFKKVKGHEGKMTRKDIRTGCLAHMVIGRQLSGKYIVTSFVKYHNHELATPKSRYKLPSQRRVSIAQAAEVEMANRSGIRQKLIFEFMSRQVEGRENVGCTAKDIINHLNSKRMKEMEEVIPPKYILKRWTKNARSGCVLDNKGQIIKEDPKLAVSNRFKDLCRTAVEISSKAVECEDASTFFAIKLVEIGIQVDNILIKRSYTPITDLDDANCQTNEDTIDKTTTNSKVKGIKKKNGASRVKGRPKSCVEKKRRSKGTTSRQVFSPTMPLPAI. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11308 323 Pfam FAR1 DNA-binding domain 11 98 IPR004330 -
Seca4g11308 323 MobiDBLite consensus disorder prediction 283 301 - -
Seca4g11308 323 MobiDBLite consensus disorder prediction 277 323 - -
Seca4g11308 323 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11308 Seca-Chr4 251595271 251597375 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g11308 FAR1 4.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11308 - K17604 tpra:123914859 283.493