Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11293 ATGGAAACAAAGGCAGATAAAATAGGCCTTCAGAGGAGTGAACAACTGAAAGAACTATACAAGTTTCTTCTTGTAGGTGAAGCTGACCCTCAAACTAAAAGGCCTTCTGCTGCATTATCTCCAGAGGACCTTTCAGATTCTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTCTACCCCAATCAGAGGTACTACTCATCTCTCATGTATTAA 216 0.4028 METKADKIGLQRSEQLKELYKFLLVGEADPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQRYYSSLMY. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11293 71 PANTHER TRANSCRIPTION FACTOR TT8 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11293 Seca-Chr4 251443233 251443448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11293 2 59 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 56.250 2.45e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11293 - - adu:107472380 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11293 4 251443233 251443448 Seca4g11293 4 251443233 251443448 ECH