Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11276 ATGGCATTATCTGGGTCTGCATCTTACTATTTGCAGAGAGGAATACCTGGTTCTGGAAACCAACCTGAATTGCATAATTCACCTAGTAACATCCGTTCACTGTCTAATGCTAACCTTCCATTTCAATCAAGCATTGGGGGTGGTACCATTGGATCCACATTGCCATTAGAATCTTCTGGAATTTCATTTCAATGTATCAATGTTGGTGCTCCTTCTGGGGCTGCAACTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCGAGAAAATATGGGCCTGATGGAGCTGTGTCATTGGCATTGACTCCAACACAAACTACTCATCCTGGAACATTGACACAAGGCCAGAAACGGGGTAGAGGGCGCCCCCTGGTTCTGGGAAGAAACAGCAGTTGGCTTCTCTTGGTAAATCTCTATTCCAGCTTTTATGTGTTGGTGTAG 438 0.4566 MALSGSASYYLQRGIPGSGNQPELHNSPSNIRSLSNANLPFQSSIGGGTIGSTLPLESSGISFQCINVGAPSGAATGEPVKRKRGRPRKYGPDGAVSLALTPTQTTHPGTLTQGQKRGRGRPLVLGRNSSWLLLVNLYSSFYVLV. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11276 145 MobiDBLite consensus disorder prediction 73 120 - -
Seca4g11276 145 MobiDBLite consensus disorder prediction 98 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11276 Seca-Chr4 251314605 251315042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11276 1 122 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 42.143 8.15e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11276 - - gmx:100799791 187.578