Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11215 ATGAGGGTCCCCTTTACCTGCTTCCCACAGAAAGAATCGTGGAAAACAGTTCTGACTCTAGCATATCAGAGCCTTGGAGTTGTGTATGGAGATTTGAGCATTTCATCCTTATACGTGTTTAGGAGGAGATTTGTTGAGGATATTAGGCACACAGAGACCAACAAGGAGGTTTATGGTGTTTTATCTTTGGTGTTTTGGACTGTGACGTTGGTCCCTTTGGTTAAATACGTGTTCATAGTCCTCAAAGCTTATGATAATGGTGAATGA 267 0.4157 MRVPFTCFPQKESWKTVLTLAYQSLGVVYGDLSISSLYVFRRRFVEDIRHTETNKEVYGVLSLVFWTVTLVPLVKYVFIVLKAYDNGE. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11215 88 Pfam K+ potassium transporter 22 88 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca4g11215 88 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 88 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11215 Seca-Chr4 250738441 250738707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11215 10 88 Inorganic Solute Cotransporters AT1G70300 74.684 1.33e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11215 K03549 - gmx:100793141 135.191