Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11175 AACTTTTACATAGTTTTCCTGGGTGCTCACCCTGAGAGTAGAGAAATAACACCAGAGTCCCATTTAAATATTCTCTCATCTGTTAAAGGAAGCCATCTTGAAGCCAAAAAATCCATGGTATACAGCTACACAAAGAGCTTTAATGCATTTGCTGCTAAATTGTCTGAGGATGAAGCCAAGAAGTTATCTGGCATAGTCATTTTTACCTCTTTTGTATGTGTAGCCATGGATGAAGTTCTTTCAGTAATTCCAAATCAGTACCGCAAGCTACACACAACAAGATCATGGGACTTTATTGGGTTACCTTTGACTGCTAAGAGAAAACTGAATTCAGAGAGTGACACAATTGTGGCTCTTTTGGATACAGGGATCACTCCTGAGTTTCAAAGCTTCAAGGATGATGGATTTGGTCCTCCACCCGCTAAATGGAAAGGAACTTGTGACCAATATGCTAATTTCTCAGGCTGCAATAACAAGATCATAGGAGCCAAATACTTCAAGATTGATGGAAGGTCTGATCCATCTGACATATTATCTCCAATAGATTTGGATGGTCATGGCTCTCACACTGCATCAACAGCAGCAGGAAATCTTGTCCCAAATGCAAGTCTCTTTGGGTTAGCAAAAGGGACTGCTCGTGGTGCAGTGCCTTCAGCCAGATTGGCAATTTACAAAATCTGCTGGACAAAAGATGGATGTGCTGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCTGTAGGTGGAGGGAATGCAAATTATGTGCAGGACTGTATAGCCATTGGAGCATTTCATGCCATGAGGAAAGGCATAATCACTGTGGCCTCAGCTGGTAATGATGGTCCAACTATGGCAACTGTCACAAATAATGCACCTTGGATTGTAACAGTAGCTGCTAGTGGCATTGATAGGGATTTCCGGAGCACTATAGAGTTGGGGAATGGAAAAAATATTTCTGGGGTAGGAGTGAGCACCTTCAATCCAAAACAAAAACAGTACCCCCTTATTAATGGGATTGATGCAGCCAGAAACTCTGCAAGCAAAGAAAATGCTAAATTCTGCTTTGAAGACTCCTTAGAGCCAAAAAAGGTGAAAGGAAAGCTTGTTTACTGTATAGGAGGAACATGGGGCACTGACTCTGTCTTGAAGGCCATTGGAGGCATTGGTACTATAATTGAAAGGGACCAATTTCTCGATGTTGATCAAATATTCATGGCTCCTGCTACCATTGTGAATAGTAGCATAGGTGAAATTATAACCAATTATATGCACTCCACAAGATCACCATCAGCAGTGATATATAAGAGCCATGAAGTAAAAAGACCAGCTCCATTTGTTGCTTCATTTTCATCTAGGGGTCCAAATCCAGGATCTCAACATGTTCTCAAGCCTGATGTTACAGCACCTGGCATTAACATCTTGGCATCTTATACACTCAAGAAGTCACTTACAGGTTTGAAAGGGGATACCCAATTTTCAGAATTTACTCTAATGTCTGGGACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCATTTCACCCAGCTTGGTCTCCTGCAGCAATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGTCAGAGAGTTACCAAGGAGGGAGAATTTGGCTTTGGTGCTGGTCAAGTGAACCCAACAAGAGCTGTGAACCCTGGTTTAGTCTATGACATGGATGACTTTGGTTATATTCAGTTCTTATGCCATGAGGGCTATAATGGTTCCACTTTGTCAGTGTTAGTTGGTTCTCCTGTAAATTGCACTTCTTTGCTTCCTGGGCTTGGCCATGATGCTATCAACTATCCCAGCATGCAACTAAGTGTGAAAAGCAACACAGATACAACAGTAGGAGTTTTTAGGAGAAGAGTGACCAATGTAGGTCCTGCACCAACTATCTATAATGCCACCATCAAATCTCCCAAAGGAGTGGAAATGACAGTGAAGCCTACTAGCCTCATTTTCTCTCACACCATGCAGAAGCGAAGCTTCAAGGTAGTGGTGAAAGCAAAATCTATGGCAAGCATGAAAATTGTATCAGGTGCCCTTATTTGGAGAAGCTCCCGTTACACTGTTAGGAGCCCTATTGTTATCTATAGTCCATAA 2166 0.4201 NFYIVFLGAHPESREITPESHLNILSSVKGSHLEAKKSMVYSYTKSFNAFAAKLSEDEAKKLSGIVIFTSFVCVAMDEVLSVIPNQYRKLHTTRSWDFIGLPLTAKRKLNSESDTIVALLDTGITPEFQSFKDDGFGPPPAKWKGTCDQYANFSGCNNKIIGAKYFKIDGRSDPSDILSPIDLDGHGSHTASTAAGNLVPNASLFGLAKGTARGAVPSARLAIYKICWTKDGCADMDILAAFEAAIHDGVDVISISVGGGNANYVQDCIAIGAFHAMRKGIITVASAGNDGPTMATVTNNAPWIVTVAASGIDRDFRSTIELGNGKNISGVGVSTFNPKQKQYPLINGIDAARNSASKENAKFCFEDSLEPKKVKGKLVYCIGGTWGTDSVLKAIGGIGTIIERDQFLDVDQIFMAPATIVNSSIGEIITNYMHSTRSPSAVIYKSHEVKRPAPFVASFSSRGPNPGSQHVLKPDVTAPGINILASYTLKKSLTGLKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPAWSPAAIRSAIITTAKPMSQRVTKEGEFGFGAGQVNPTRAVNPGLVYDMDDFGYIQFLCHEGYNGSTLSVLVGSPVNCTSLLPGLGHDAINYPSMQLSVKSNTDTTVGVFRRRVTNVGPAPTIYNATIKSPKGVEMTVKPTSLIFSHTMQKRSFKVVVKAKSMASMKIVSGALIWRSSRYTVRSPIVIYSP. 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11175 721 Pfam Fibronectin type-III domain 620 718 IPR041469 -
Seca4g11175 721 Gene3D Peptidase S8/S53 domain 114 581 IPR036852 GO:0004252|GO:0006508
Seca4g11175 721 ProSiteProfiles Serine proteases, subtilase domain profile. 95 571 - -
Seca4g11175 721 Pfam Subtilase family 113 561 IPR000209 GO:0006508|GO:0008236
Seca4g11175 721 CDD PA_subtilisin_like 319 443 - -
Seca4g11175 721 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 91 IPR037045 -
Seca4g11175 721 Gene3D - 588 720 - -
Seca4g11175 721 PRINTS Subtilisin serine protease family (S8) signature 509 525 IPR015500 -
Seca4g11175 721 PRINTS Subtilisin serine protease family (S8) signature 182 195 IPR015500 -
Seca4g11175 721 PRINTS Subtilisin serine protease family (S8) signature 112 131 IPR015500 -
Seca4g11175 721 FunFam Subtilisin-like protease SBT1.5 114 326 - -
Seca4g11175 721 Pfam Peptidase inhibitor I9 3 63 IPR010259 -
Seca4g11175 721 CDD Peptidases_S8_3 89 545 IPR034197 -
Seca4g11175 721 Gene3D - 313 449 - -
Seca4g11175 721 SUPERFAMILY Subtilisin-like 90 575 IPR036852 GO:0004252|GO:0006508
Seca4g11175 721 ProSitePatterns Serine proteases, subtilase family, serine active site. 510 520 IPR023828 -
Seca4g11175 721 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 717 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11175 Seca-Chr4 250251935 250255978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11175 1 557 Subtilisin-like Serine Gene Family AT4G00230 64.632 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11175 - - ccaj:109800351 1251.88