Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11167 ATGATGAAGAAGATTGACCTTCTTGAAGCTTCAAAACGGAAACTCTTGGGAGAAGGCTTGGGATCTTGTTCCATTGATGAACTACAACAGATAGAACAACAACTGGAGAAGAGTATAATCAATGTTCGAGCAAGAAAGACTCAGGTTTTCATGGAACAAATTGAGCAGCTAAAAGAAAAGGAAAAAGCCCTTGTTGCAGAAAATTCCAGGCTTTCTGAGAAGGTGAAGTTACTTCAATTCTATCTGCCAGCAGCAACAAAGGATCAGAGAGAAAATCAACCCCAACCCTATGCAGAAAGTAGTCCAAGTTCAGATGTTGAGACTGAATTGTTCATTGGGCTTCCAGAAGCAAGAACAAGGCGCATTTCTCCTCAGGCCTAA 381 0.4121 MMKKIDLLEASKRKLLGEGLGSCSIDELQQIEQQLEKSIINVRARKTQVFMEQIEQLKEKEKALVAENSRLSEKVKLLQFYLPAATKDQRENQPQPYAESSPSSDVETELFIGLPEARTRRISPQA. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11167 126 MobiDBLite consensus disorder prediction 86 107 - -
Seca4g11167 126 MobiDBLite consensus disorder prediction 86 126 - -
Seca4g11167 126 ProSiteProfiles K-box domain profile. 1 81 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca4g11167 126 Pfam K-box region 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca4g11167 126 Coils Coil 25 45 - -
Seca4g11167 126 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11167 Seca-Chr4 250155314 250156695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11167 1 62 MADS-box Gene Family AT2G45660 80.645 5.72e-28 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11167 - - gmx:100807963 155.992