Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11154 ATGTCCAAATTTGATCCATTCACCTACTTCAATCTGACTCTCAACCCTGACGGAACCCTCACCCGTGGCCTAAAGTATCCGACGATGGAAGCGAACCCAGAGCCATCTCCGGGTAACTCCACAGTTTCCAAAGACATAACCATTGACCAAGAGAACAAAACATGGGTTCGAGTTTTCAGGCCAACAAAGCTTCCTTCCAATGACAACACTGTAGTGCGTCTTCCCATCTTGATTTATTTCCACAACGGTGGCTTTATCATCCACAGCCCCTCCAGCTCCGGCATCCACGCAAAGTGCGTTCAACTCGCCACTGACATCCCCTCCATCGTCGTCTCCGTTGCCTACCGCCTCGCACCGGAGAGTCGCCTCCCGACACAGTACCACGACGGACGCGACGCCGTTTTGTGGGTGAAGAAACAAATGACGGATCCGAACGGGGAGCAGTGGCTGAGAAACTACGGTGACCCTTCAAGGTGTTACCTCTATGGATGTGGATGTGGCGGGAACATTGCTTTCAACGTGGCCATGATGGTTGCTGACGTGGACTTAGAGCCTTTGAGGATTGGTGGACTGATATTTAACCAACCTATGTTTGGAGGGGAGAAAAGGACTGCCTCGGAATTAAGGTTTGCTACGGACCAAACACTGCCTTTGCCTGTTTTGGACATGATGTGGGACTTGGCTTTGCCTAAGGAGATAGACCGTGACCATAGGTATTGTAATCCGATGGTGAAAGGACCACACTTTGATAGTGTGAAGAAGTTGAAGAGGTGCCTTGTTGTTGGGTATGGTGGGGATATCATGGTGGATAGGCAGCAGGAGTTAGTGACAATGTTGGTAAAGTGTGGGGTTCAGGTGGAAGCCAGGTTTGATCCGGTGGGCTTCCATAATATTGACATTGTTGACCCTTCCAGGGCTACCGCCGTAACAAATATTGCCAGGGAATTTATTCTTTAA 957 0.4984 MSKFDPFTYFNLTLNPDGTLTRGLKYPTMEANPEPSPGNSTVSKDITIDQENKTWVRVFRPTKLPSNDNTVVRLPILIYFHNGGFIIHSPSSSGIHAKCVQLATDIPSIVVSVAYRLAPESRLPTQYHDGRDAVLWVKKQMTDPNGEQWLRNYGDPSRCYLYGCGCGGNIAFNVAMMVADVDLEPLRIGGLIFNQPMFGGEKRTASELRFATDQTLPLPVLDMMWDLALPKEIDRDHRYCNPMVKGPHFDSVKKLKRCLVVGYGGDIMVDRQQELVTMLVKCGVQVEARFDPVGFHNIDIVDPSRATAVTNIAREFIL. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11154 318 Pfam alpha/beta hydrolase fold 77 297 IPR013094 GO:0016787
Seca4g11154 318 SUPERFAMILY alpha/beta-Hydrolases 29 306 IPR029058 -
Seca4g11154 318 Gene3D alpha/beta hydrolase 7 318 IPR029058 -
Seca4g11154 318 PANTHER ARYLACETAMIDE DEACETYLASE 14 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11154 Seca-Chr4 249970288 249972260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11154 17 307 Carbohydrate Esterase AT5G16080 34.007 1.89e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11154 - - gmx:100813863 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11154 4 249970288 249972260 Seca4g11154 4 249970288 249972260 ECH