Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11149 ATGGCAGAACCACCACCACCTTCCACCGACACTCCCACCTCCGCCATGGATCCTTACGAATTCCTCAAAATCAAACTCAACCCCGACGGTTCCCTCACTCGAGACTACGCTTTCCCCGACCTCCCTCCATCCCCTACCCCCACCGATGATCCCAACCAAATCGCTCTCTCCAAAGACATTCCTCTCAACTCCGCCACCGGAACCTCCCTCCGCCTCTTCATCCCCAACCCTCCTCCTTCCCCTTCCACAAAACTCCCCCTCATCATCTACTACCACGGCGGCGGTTTCATCCTCTACCACCCTTCCTCCTTCATCTTCCACAAATCCTGCTCCGACCTTTCCGCTAACTTCCCCGCCATCATCGCCTCCATCGACTACCGTCTCTGCCCGGAGCACCGCCTCCCCGCCGCCTACGACGACGCTGTCGACGCCATCCAGTGGGTCCGATCCCAAGCCCTCGACCCGACCCAATCAGACCCATGGATGCGGGACTACGCGGACTTCTCTAACTGCTTCATAATGGGAAGCAGCGCGGGGGGAAACATGGTGTACTTCGCGGCTCTACGTGCACTCGACCTTGATCTTGATCCGGTTAAGATCGTAGGGCTCATAATGAACGTTCCGTATTTTAGTGGGGAAGAGAGGTCAGAATCGGAACAGCGCTTGATCAACGATCATATCTGCCCGTTGCCCGCGAACGATCTCATGTGGTCCCTTTCGTTACCTGAGGGCGCGGATCGTGACCATGAGTACTGCAATCCGATGGTGTCGGAAGGGGTATATGGCGAGAAGATCGGACGGCTGCCAAGGTGTTTCATCAACGGGTACGGTGGGGATCCTTTGGTGGACAAGCAGAAGGCGTTGGCTAAGATTATGGAGTCACGTGGAGTGCACGTGGAGCCACATTTTGTTGAGGATGGGTTTCATGCTGTGGAGCTCTTTGATCAGGCAAAGGCACTGGCTTTGTTAGAAAATGTCAAGAAATTTGTGCACTCCACTATTAGTCAATGA 1011 0.5519 MAEPPPPSTDTPTSAMDPYEFLKIKLNPDGSLTRDYAFPDLPPSPTPTDDPNQIALSKDIPLNSATGTSLRLFIPNPPPSPSTKLPLIIYYHGGGFILYHPSSFIFHKSCSDLSANFPAIIASIDYRLCPEHRLPAAYDDAVDAIQWVRSQALDPTQSDPWMRDYADFSNCFIMGSSAGGNMVYFAALRALDLDLDPVKIVGLIMNVPYFSGEERSESEQRLINDHICPLPANDLMWSLSLPEGADRDHEYCNPMVSEGVYGEKIGRLPRCFINGYGGDPLVDKQKALAKIMESRGVHVEPHFVEDGFHAVELFDQAKALALLENVKKFVHSTISQ. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11149 336 Gene3D alpha/beta hydrolase 19 335 IPR029058 -
Seca4g11149 336 PANTHER ARYLACETAMIDE DEACETYLASE 25 311 - -
Seca4g11149 336 SUPERFAMILY alpha/beta-Hydrolases 47 328 IPR029058 -
Seca4g11149 336 Pfam alpha/beta hydrolase fold 88 311 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11149 Seca-Chr4 249948653 249949663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11149 24 317 Carbohydrate Esterase AT5G16080 35.667 1.45e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11149 - - gmx:100814398 452.595