Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11143 ATGGAGGAATCTGGAAAGACTAATATTGCTGACTTTTTTCCAATTCTTCGTTTAATTGACCCACAAGGTGTGCGAAAGAGGGGAGAAGATTATACTCAAAAGCTATTCAAGGTCTTCAATGGCATTATTGATGAAAGATTGCGGTTAAGAGCTTCAGAAATGGATTCTAGAGAGGGTTGTTGTGATGCATTAGATTCGTTCCTCAATCTCATTCAAGAAAATGATTCAGAAGCATTGAGTCGCCATGATTTCCTACATTTACTTGTGGACTTATTTGTTGCTGGGACAGACACAACAACAAGCACAGTGGAGTGGGCAATGGCAGAATTGCTTCATAACCCAGAAAAGATGACCAAAGCCAAACAAGAGCTTTTACAAATCCTTGGCAAAGATGGCAAACCTGAAGAATCAGACATCTCAAAATTTCCTTACCTTGAGGCAATTGTAAAGGAGACATTTCGGTTACACCCACCTATCCCCTTTTTATACCACAAATCAAAGTCTGAGGCTGAAATATGTGGCTTCAGAGTGCCCAAAGATACACAAGTTCTCATTAACATATGGGCCATTGGAAGAGATTCCAGTGCATGGAGTGATCCAAATTCCTTTGAGCCAGAAAGATTTTTAGACTGCAAAATGGATTTTAAAGGCCATGACTTTGAGCTCATTCCATTTGGATCTGGAAGAAGGATGTGTCCTGGACTTCCACTGGCTAACAGATCTGTGCACTTTATTTTGGCCTCTCTTCTGCATTGCTTTGATTGGGAGATTGCAGGTGCCAAGAAGCATCATGAATTGGACATGAGTGAGAAATATGGGCTTGCTATACGCAGGGATCAACCACTTCTACTAATTCCAGTCAAAACCTACTAA 873 0.4078 MEESGKTNIADFFPILRLIDPQGVRKRGEDYTQKLFKVFNGIIDERLRLRASEMDSREGCCDALDSFLNLIQENDSEALSRHDFLHLLVDLFVAGTDTTTSTVEWAMAELLHNPEKMTKAKQELLQILGKDGKPEESDISKFPYLEAIVKETFRLHPPIPFLYHKSKSEAEICGFRVPKDTQVLINIWAIGRDSSAWSDPNSFEPERFLDCKMDFKGHDFELIPFGSGRRMCPGLPLANRSVHFILASLLHCFDWEIAGAKKHHELDMSEKYGLAIRRDQPLLLIPVKTY. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11143 290 Pfam Cytochrome P450 6 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 288 - -
Seca4g11143 290 SUPERFAMILY Cytochrome P450 6 287 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS E-class P450 group I signature 186 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS E-class P450 group I signature 103 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS E-class P450 group I signature 222 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS E-class P450 group I signature 83 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS E-class P450 group I signature 232 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS E-class P450 group I signature 146 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS P450 superfamily signature 232 243 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS P450 superfamily signature 94 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 PRINTS P450 superfamily signature 223 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 225 234 IPR017972 GO:0005506|GO:0016705
Seca4g11143 290 Gene3D Cytochrome P450 1 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11143 290 FunFam Geraniol 8-hydroxylase 32 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11143 Seca-Chr4 249822939 249824998 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11143 1 288 Cytochrome P450 AT2G45550 50.000 4.52e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11143 - - aprc:113851120 471.085