Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11141 ATGTTTGCAAACCGTCTGACACGTGAGTATGAGGAAGGAGTGGAAATGTTTATAAAATTTACCATGGACCATGCAACAAACCCTAGTAGAATTCTCTGCCTTTGTACGAAGTGTTTTTGTTCTAAGCGAGTTAGTGAAACAGAGTTGAGGGACCATCTTTTCTGTTTTGGAATTGATCAGAGTTACACATGTTGGACATTTCATGGTGAGATTAGGAGTGAACAAAGTGGTATGGGAGAGAATAATGTCAATGTAGAACCAAGTGATGATGACTTTGGGACCGGGTGGGAGGATTGCGACCGAATTGATGAGATTCGAAAGGTGGTTGAAGATGACCTCAGAGATTGTCCCCAAATGTTTGATACCCTAGCCAGTGATGCTGAAAAGCCATTGTACAACGGGTGCACCAAGTACACAAGGTTGTCAGCTGTGTTGAAGTTGTATAATTTAAAAGCAACAAATGGTTGGTTTGACAAGAGTTTCACAGAGTTACTCACCTTGTTGAAGGAGATGTTACCGGAGGACAATGTGCTACCTAACAGAACATATGAGGCAAAGAAGATGTTAAGTTCTATTGGGATGAGCTATGAGAAGATACATGTTTGTCCCAATGATTGCATTTTGTTCAGAAATGAGCATGCGTCATTAAGTGTGTGTCCTAAATGCAATTTGCCTCGTTATAAGAAAGAGACTACACCAACAAAGGATGGCATGTTGAGACATCCCGCTGATTCTCCGCAGTGGAGGAGGATTGATGATGAGTACCCCTCTTTTGGCGAGGAACCAAGAAATCTTCGCCTTGCTTTATCAACAGATGGAATGAATCCGCATGCGGAAATACATGATGTTATCTATGTTGATATCGGGACCCAGACAACCGGATCTTTTAAAGAATATAGAAAGTTGGGTGGATTCCCAGAAGCACGGAATAGGATTATACCTGATCCCATATGGTACCGCATTAAGTGTCCTACCCAAACAAACAATGACGATTGTGGGCTCTTCGTAATGCGTTATATGAAGGAGATCATTGATCAAAACAGACTCACAATACCTAAAGAGTACTTTGCTCAGTTTCAAAGCTCAACCTACACAACAGAGCAGCTTGATGGGGTTCAGGAAGAATGGGCAAACCATCATCACTCATGTCCTCATCAAAAGACCCAAATCCTCCAAATACCCTCCACCTCCGGTACCTCACCCTTTTCCTATCATAGGAAATATCTTGGAATTTGGCCCAACCAACCTCACCAGTCACTTGCCAAGCTTTCTCAAACTCATGGACCTATAATGAGTCTAAAACTTGGTAACATAACCACCATAGTTATTTCCTCTCCACAAGTTGCCAAAGGAGTGCTGCATAAAAATGATCAAATCTTCTCTAACAGGAAAGTCCCAGATACTCTCCGAGCACTTGACTACCACAAATTTTCAATGGGATGGATTCCTCTTTCAGCTAAATGGGGGACCCTTAGGAAAATTTGTGCTACCAATATATTCTCTTCCAAGAAGCTTGACTCTACACAAGTTCTCCGTCAAAGGAAGGTTCAAGAATTGCTAGATCATGTTAAGGAATGTTGCAAGAAAGGGCAAGCTTTGGATATTGGTGAGGCTTCCTTTATTACCGTGCTTAATTCCATATCAAACACTTTATTCTCTATGGATTTGGCTCATTACACTTCTAATAAATCTCAAGAGTTTAAAGACATCATTTGGGGTATCATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGTTGGCTTGATCCACAGCGTGCTCGTGCAAGAATGAGTCGTTATTTTGGAAAGTTAATTGCATTTTTTGATAGTCTTGTAGAAGAAAGGTTGCGCTTAAGAGCTTTAGGAAATGAAGAATCTAAGGCGTGCAATGATGTGTTAGATTCGATGGTGGTACAAATGCTAGAAGACAATACGCAATTGAGCCGTCCTCACGATTTATTTATGGCTGGGATAGACACAACATCAAGCTCAATAGAATGGGCGATGACTGAGTTGGTACGTAACCCAGAAAAACTAGAAAAAGCTAGAGAAGAGCTTCATCAGGTCTTTGACAAAGATGAATTACAACTTGAAGAATCACATATATCAAAGCTTCCTTTCCTACAAGCAGTGGTGAAGGAAACTCTCCGCTTGCATCCACCTGCTCCATTGTTATTGCCACGCAAGTCAGAAGCTGATGTTGAACTATGTGGCTTTATGGTGCCTAAAAATGCACAAATTCTAGTTAATGTGTGGGCCATGGGGAGAGATCCAAGTATTTGGAAAAACCCAAATCAATTCATGCCGGAGAGATTCTTAGACAATAAGATTGATTTTAAAGGCCAATATTTTGAGTTAATCCCCTTTGGATCTGGAAGAAGGATCTACCCTGGATTACCATTGGCTCATAGAACAATACACATTGTGTTGGCCTCTTTTCTATTTAGCTATAATTGGAAGCTGGCGTGTGGGCAAATGCCAAAAGAGATGGATATGTCTGAGAAATGTGGCATTACTTTGCACAAGGCACAACCCCTCCAAGTTATCCCCATCCAAGCATAA 2577 0.4125 MFANRLTREYEEGVEMFIKFTMDHATNPSRILCLCTKCFCSKRVSETELRDHLFCFGIDQSYTCWTFHGEIRSEQSGMGENNVNVEPSDDDFGTGWEDCDRIDEIRKVVEDDLRDCPQMFDTLASDAEKPLYNGCTKYTRLSAVLKLYNLKATNGWFDKSFTELLTLLKEMLPEDNVLPNRTYEAKKMLSSIGMSYEKIHVCPNDCILFRNEHASLSVCPKCNLPRYKKETTPTKDGMLRHPADSPQWRRIDDEYPSFGEEPRNLRLALSTDGMNPHAEIHDVIYVDIGTQTTGSFKEYRKLGGFPEARNRIIPDPIWYRIKCPTQTNNDDCGLFVMRYMKEIIDQNRLTIPKEYFAQFQSSTYTTEQLDGVQEEWANHHHSCPHQKTQILQIPSTSGTSPFSYHRKYLGIWPNQPHQSLAKLSQTHGPIMSLKLGNITTIVISSPQVAKGVLHKNDQIFSNRKVPDTLRALDYHKFSMGWIPLSAKWGTLRKICATNIFSSKKLDSTQVLRQRKVQELLDHVKECCKKGQALDIGEASFITVLNSISNTLFSMDLAHYTSNKSQEFKDIIWGIMEEAGRPNVVDFFPIFRWLDPQRARARMSRYFGKLIAFFDSLVEERLRLRALGNEESKACNDVLDSMVVQMLEDNTQLSRPHDLFMAGIDTTSSSIEWAMTELVRNPEKLEKAREELHQVFDKDELQLEESHISKLPFLQAVVKETLRLHPPAPLLLPRKSEADVELCGFMVPKNAQILVNVWAMGRDPSIWKNPNQFMPERFLDNKIDFKGQYFELIPFGSGRRIYPGLPLAHRTIHIVLASFLFSYNWKLACGQMPKEMDMSEKCGITLHKAQPLQVIPIQA. 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11141 858 Gene3D Adenoviral Proteinase; Chain A 290 368 - -
Seca4g11141 858 CDD CYP76-like 424 855 - -
Seca4g11141 858 Gene3D Cytochrome P450 381 855 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS P450 superfamily signature 661 678 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS P450 superfamily signature 715 726 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS P450 superfamily signature 792 801 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 Pfam Transposase family tnp2 236 280 IPR004242 -
Seca4g11141 858 SUPERFAMILY Cytochrome P450 401 855 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 424 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 801 824 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 755 779 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 670 696 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 791 801 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 650 667 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 PRINTS E-class P450 group I signature 714 732 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 SUPERFAMILY Cysteine proteinases 313 359 IPR038765 -
Seca4g11141 858 FunFam Cytochrome P450 76C4 397 854 - -
Seca4g11141 858 Pfam Cytochrome P450 413 847 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11141 858 Pfam Transposase-associated domain 3 70 IPR029480 -
Seca4g11141 858 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 414 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11141 Seca-Chr4 249771293 249776204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11141 415 857 Cytochrome P450 AT2G45550 47.672 2.13e-147 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11141 - K26037 gmx:100809483 675.241