Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11140 ATGGAGTACTACCTTGCATTTCTATTGCTGATTTCCTTGGTGTGGATAAGCATTATTCATGTCCTCATCAAAAGACCCAAATCCTCCAAATACCCTCAACCTCCAGGACCTCACTCTTTTCCTATCATAGGAAATATCTTGGAACTTGGCAACCAACCTCACGAGGCACTTGCCAAGCTTTCTCAAACTCATGGACCTATAATGAGTCTGAAGCTTGGTAACATAACCACCATAGTCATTTCCTCTCCACAAGTTGCCAGAGAAGTACTGCATAAAAATGACCAAAACTTCTCTAACAGGACAGTCCCAGACACTGTTCGAGCACTTGATCACCACAAATTTTCAATGGCATGGATGCCTCTTTCAGCTAAATGGGGGACCCTTAGGAAAATTTGTGCTACCAATATATTCTCTTCCAATAAGCTTGACTCTACACAAGTTCTCCGTCAAAGGAAGGTGCAAGAATTGTTGGATCATGTTAAGGAATGTTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCCTTTATTGCCGTGCTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTGGCTCATTACACTTCTAATAAATCTCAAGAGTTCAAAGACATCATTTGGGGTATAATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGTTTTCTTGATCCACAACGTGCTCGTGCAAGAATGACCCGTTATTTTGGAAAGTTAATTGCATTTTTTGATGGTCTTATAGAAGAAAGGTTGCGCTTAAGAGCTTTAGGAAATGAATCTAAGTCATGCGATGATGTGTTAGATTCTGTGTTGGTGCAAATGCTAGAAGACAATTCGCAATTGAACCGCCCTTACGTATTGCATTTATTCTTGGATTTATTTGTGGCTGGGATAGACACAACATCAAGCTCAATAGAATGGGCGATGACTGAGTTGCTACGTAACCCAGAAAAACTAGAAAAAGTTAGAGAAGAGCTTCATCAGGTCTTTGACAAAGATGAATTACAACTTGAAGAATCACATATATCAAAGCTTCCTTTCCTACAAGCAGTGGTGAAGGAAACTCTCCGCTTGCATCCACCCATTCCGTTGTTATTGCCACACAAGTCAGAAGTTGATGTTGAACTATGTGGCTTTATGTTGCCTAAAAATGCACAAATTCTAGTTAATGTATGGGCCATGGGGAGAGATCCAAGTATTTGGGAAAACCCAAATCAATTCATGCCAGAGAGATTCTTAGACAATGAGATTGATTTTAAAGGTCAGTATTTTGAGTTAATTCCCTTTGGATCTGGAAGAAGGATATGCCCTGGGTTGCCATTGGCTCATAGAACAATACATATTGTGTTGGCCTCTCTCCTATATAGTTATAATTGGAAGCTGGTGTGTGGGCAAATGCCAGAGGAGATGGACATGTCTGAGAAATATGGCATTACTTTGAACAAGGCACAACCCCTCCAAGTCATCCCCATCCAAGCATAA 1503 0.4045 MEYYLAFLLLISLVWISIIHVLIKRPKSSKYPQPPGPHSFPIIGNILELGNQPHEALAKLSQTHGPIMSLKLGNITTIVISSPQVAREVLHKNDQNFSNRTVPDTVRALDHHKFSMAWMPLSAKWGTLRKICATNIFSSNKLDSTQVLRQRKVQELLDHVKECCKKGQALDIGEASFIAVLNSISNTFFSMDLAHYTSNKSQEFKDIIWGIMEEAGRPNVVDFFPIFRFLDPQRARARMTRYFGKLIAFFDGLIEERLRLRALGNESKSCDDVLDSVLVQMLEDNSQLNRPYVLHLFLDLFVAGIDTTSSSIEWAMTELLRNPEKLEKVREELHQVFDKDELQLEESHISKLPFLQAVVKETLRLHPPIPLLLPHKSEVDVELCGFMLPKNAQILVNVWAMGRDPSIWENPNQFMPERFLDNEIDFKGQYFELIPFGSGRRICPGLPLAHRTIHIVLASLLYSYNWKLVCGQMPEEMDMSEKYGITLNKAQPLQVIPIQA. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11140 500 SUPERFAMILY Cytochrome P450 29 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 FunFam Cytochrome P450 76C4 25 496 - -
Seca4g11140 500 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Seca4g11140 500 CDD CYP76-like 61 497 - -
Seca4g11140 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 Gene3D Cytochrome P450 19 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11140 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11140 Seca-Chr4 249749747 249752494 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11140 4 499 Cytochrome P450 AT2G45550 47.896 1.09e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11140 - - gmx:100809483 770