Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11138 ATGGAGTACTACCTTGCATTTCTTCTGCTGATTTCCTTGGTGTGGATAAGCATTATTCATGTCCTCATCAAAAGACCCAAATCCTCCAAATACTCTCAACCTCCAGGACCTCACCCTTTTCCTATCATAGGAAATATCTTGGAACTTGGCAACCAACCTCACCAGGCACTTGCCAAGCTTTCTCAAACTCATGGACCTATAATGAGTCTGAAGCTTGGTAACATAACCACCATAGTCATTTCCTCTCCACGTGTTGCCAGAGAAGTACTGCATAAAAATGACCAAATCTTCTCTAACAGGACAGTCCCAGATACTGTTCGAGCACTTGACCACCACAAATTTTCAATCACATGGATTCCTCTTTCAGCTAAATGGGGGACCCTTAGGAAAATTTGTGCTACCAATATATTCTCTTCCAATAAGCTTGATTCTACACAAGTTCTCCGTCAAAGGAAGGTGCAAGAATTGCTGGATCATATCAAGGAATGTTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCCTTTATTACCGTGCTTAATTCCATATCAAACACTTTATTCTCTATGGATTTGGCTCATTACACTTCTAATAAATCTCAAGAGTTCAAAGACATCATCTGGGGTATAATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGTTTGCTTGATCCACAACGTGCTCGTGCAAGAATGACCCGTTATTTTGGAAAGTTAATTGCATTTTTTGATGGTCTTATAGAAGAAAGGTTGCGCTTAAGAGCTTTAGGAAATGAATCTAAGTCATGCGATGATGTGTTAGATTCTGTGTTGGTGCAAATGCTAGAAGATAATTCGCAATTGAACCGCCCTACCGTATTGCATTTATTCTTGGTTTTATTTGTGGCTGGGATAGACACAACATCAAGCTCAATAGAATGGGCGATGACTGAGTTGCTACGTAACCCAGAAAAACTAGAAAAAGTTAGAGAAGAGCTTCGTCAGGTCTTTGACAAAGATGAACAACTTGAAGAATCACAAATATCAAAGCTTCCTTACCTACAAGCAGTGGTGAAGGAAACTCTCCGCTTGCATCCACCTGTTCCGTTGTTATTGCCACACAAGTCAGAAGTTGATGTTGAACTATGTGGCTTTATGGTTCCTAAAAATGCACAAATTCTAGTTAATGTGTGGGCCATGGGGAGAGATCCAAGTATTTGGAAAAACCCAAATCAATTCATGCCAGAGAGATTCTTAGACAATGAGATTGATTTTAAAGGTCAGTATTTTGAGTTAATTCCCTTTGGATCTGGAAGAAGGATCTGCCCTGGGTTGCCATGGGCTCATAGAACAATACATATCGTGTTGGCCTCTATACTATTTAGCTATAATTGGAAGCTGGCGTGTGGGCAAATGCCAAAAGATATGGATATGTCTGAGAAATGTGGCATTACTTTGCACAAGGCACAACCCCTCCAAGTTATCCCCATCCAAGCATAA 1500 0.406 MEYYLAFLLLISLVWISIIHVLIKRPKSSKYSQPPGPHPFPIIGNILELGNQPHQALAKLSQTHGPIMSLKLGNITTIVISSPRVAREVLHKNDQIFSNRTVPDTVRALDHHKFSITWIPLSAKWGTLRKICATNIFSSNKLDSTQVLRQRKVQELLDHIKECCKKGQALDIGEASFITVLNSISNTLFSMDLAHYTSNKSQEFKDIIWGIMEEAGRPNVVDFFPIFRLLDPQRARARMTRYFGKLIAFFDGLIEERLRLRALGNESKSCDDVLDSVLVQMLEDNSQLNRPTVLHLFLVLFVAGIDTTSSSIEWAMTELLRNPEKLEKVREELRQVFDKDEQLEESQISKLPYLQAVVKETLRLHPPVPLLLPHKSEVDVELCGFMVPKNAQILVNVWAMGRDPSIWKNPNQFMPERFLDNEIDFKGQYFELIPFGSGRRICPGLPWAHRTIHIVLASILFSYNWKLACGQMPKDMDMSEKCGITLHKAQPLQVIPIQA. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11138 499 Coils Coil 326 346 - -
Seca4g11138 499 FunFam Cytochrome P450 76C4 25 495 - -
Seca4g11138 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Seca4g11138 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 498 - -
Seca4g11138 499 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 Gene3D Cytochrome P450 19 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 SUPERFAMILY Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 CDD CYP76-like 61 496 - -
Seca4g11138 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11138 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11138 Seca-Chr4 249722570 249725520 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11138 4 498 Cytochrome P450 AT2G45550 47.992 4.83e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11138 - - gmx:100809483 770