Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11135 ATGGATTACCTTTCACTTCTTCTGCTAATTTCCTTAGTGTGGATAAGTATTCATGTCCTCATCTCCACCTTAAGGATCAAAACACCAAAATCCTCCAAATACCCTCCAGGACCTCACCCTTTTCCTATCATAGGAAATATTTTGGAACTTGGCAATCAACCTCACCAGGCACTTGCCAAGCTTTCTCAAACTTATGGACCTGTAATGAGTCTAAAGCTTGGTAACATAACCACCATAGTCATTTCCTCTCCACAAGTTGCCAAAGAAGTAATGCATAAATATGATCAAATCTTCTCTAACAGGACAATCCCAGATACTCTTACAGCACTTGACCATCACAAATTTTCAGTTGTATGGATGCCACCTTTAGCAATGTGGAGGACTCTTAGGAAAGCTTGTGCTACTAAAGTGTTCTCTTCTCAACAGCTTGATTCTACACAAGTTCTTCGCCAGAGGAAGGTGCAAGAATTGTTGGATCATGTTAAGGAATGTTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCTTTTACCACTGTGCTTAATTCCATATCAAACACTTTCTTCTCTATGGATTTGGCTCATTACACTTCTGATAAGTCTCAAGAGTTCAAGGATATCGTTTGGGGTATCATGGAAGAAGCTGGAAAGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGCCTGCTTGATCCACAAGGTGCACGTACAAGAATGAACAATTATTTTGAAAAGTTGATTTCATTTTTTGATGGTCTTATAGAAGAAAGATTGCACTTAAGAGCTTCAGAAAATGAAATCAAGGCATCCAATGACGTGTTAGACTCTATGATAGAACTTATGCTAGAAGACAATTCACAAGTAAGCCGTCCTCATGTATTGCATTTATTTCTGGTGGATTTATTTGTGGCCGGAATAGACACAACATCAGGCTTAATAGAATGGGCAATGACTGAATTGCTACGTAACCCAGAAAAACTTGAAAAGGTTAGAGAAGAGCTTCAACAAGTGCTCATCAAAGGTGAACAATTTGAAGAATCACATATCTCAAAGCTTCCTTTCCTTAGAGCTGTGGTGAAGGAAACTTTTCGTTTGCATCCACCTGTCCCATTATTAGTGCCACGCAAATTAGAAGTTGATGCTCAACTATGTGGGTTCATGCTGCCTAAAAATGCACAAATTATTGTTAATGTGTGGGCCATAGGGAGAGATTCAAAAATTTGGGAAAACCCAAATGAATTTATGCCTGAAAGATACTTGGATTGTGAGATTGATTTTAAAGGTCTAGATTTTGAACTGATTCCCTTTGGAGCTGGAAGAAGGATATGCCCAGGATTGCCATTAGCTTATAGGACTGTGCACATTGTATTAGCCTCTCTTCTATGTGACTTTGATTGGAAGCTCGCAAATGGCGAAATGCCACAGAACATAGATGTGTCTGAGAAATATGGGATTAGTTTGCATAAGGCGCAACCGCTCCAAGTCATTCCCATCCAAGCATAA 1506 0.3944 MDYLSLLLLISLVWISIHVLISTLRIKTPKSSKYPPGPHPFPIIGNILELGNQPHQALAKLSQTYGPVMSLKLGNITTIVISSPQVAKEVMHKYDQIFSNRTIPDTLTALDHHKFSVVWMPPLAMWRTLRKACATKVFSSQQLDSTQVLRQRKVQELLDHVKECCKKGQALDIGEASFTTVLNSISNTFFSMDLAHYTSDKSQEFKDIVWGIMEEAGKPNVVDFFPIFRLLDPQGARTRMNNYFEKLISFFDGLIEERLHLRASENEIKASNDVLDSMIELMLEDNSQVSRPHVLHLFLVDLFVAGIDTTSGLIEWAMTELLRNPEKLEKVREELQQVLIKGEQFEESHISKLPFLRAVVKETFRLHPPVPLLVPRKLEVDAQLCGFMLPKNAQIIVNVWAIGRDSKIWENPNEFMPERYLDCEIDFKGLDFELIPFGAGRRICPGLPLAYRTVHIVLASLLCDFDWKLANGEMPQNIDVSEKYGISLHKAQPLQVIPIQA. 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11135 501 CDD CYP76-like 62 498 - -
Seca4g11135 501 SUPERFAMILY Cytochrome P450 29 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 Coils Coil 328 348 - -
Seca4g11135 501 Gene3D Cytochrome P450 19 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 FunFam Cytochrome P450 76C4 26 497 - -
Seca4g11135 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 500 - -
Seca4g11135 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca4g11135 501 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g11135 501 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11135 Seca-Chr4 249704256 249707703 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11135 1 500 Cytochrome P450 AT2G45550 47.732 7.59e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11135 - - gmx:100809483 789.645